Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
CUX2O14529 Y_RNA.243-201ENST00000364481 109 ntBASIC0.99□□□□□ -2.25
CUX2O14529 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
CUX2O14529 AC022493.2-201ENST00000506122 481 ntBASIC0.99□□□□□ -2.25
CUX2O14529 AC144568.1-201ENST00000520139 137 ntBASIC0.99□□□□□ -2.25
CUX2O14529 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
CUX2O14529 AC084782.3-201ENST00000612282 578 ntBASIC0.99□□□□□ -2.25
CUX2O14529 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.99□□□□□ -2.25
CUX2O14529 CASC19-280ENST00000642102 1351 ntBASIC0.99□□□□□ -2.25
CUX2O14529 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
CUX2O14529 RNU6-1301P-201ENST00000362724 104 ntBASIC0.99□□□□□ -2.25
CUX2O14529 SNORA12.1-201ENST00000390873 148 ntBASIC0.99□□□□□ -2.25
CUX2O14529 MIR873-201ENST00000401120 77 ntBASIC0.99□□□□□ -2.25
CUX2O14529 MIR891A-201ENST00000401237 79 ntBASIC0.99□□□□□ -2.25
CUX2O14529 AL358944.1-201ENST00000528537 144 ntBASIC0.99□□□□□ -2.25
CUX2O14529 AC080078.2-201ENST00000603766 501 ntBASIC0.99□□□□□ -2.25
CUX2O14529 uc_338.22-201ENST00000622722 187 ntBASIC0.99□□□□□ -2.25
CUX2O14529 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CUX2O14529 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
CUX2O14529 RNU6-163P-201ENST00000384396 106 ntBASIC0.98□□□□□ -2.25
CUX2O14529 Y_RNA.488-201ENST00000384403 102 ntBASIC0.98□□□□□ -2.25
CUX2O14529 MIR146A-201ENST00000385201 99 ntBASIC0.98□□□□□ -2.25
CUX2O14529 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.98□□□□□ -2.25
CUX2O14529 Y_RNA.621-201ENST00000411065 96 ntBASIC0.98□□□□□ -2.25
CUX2O14529 AL022718.1-201ENST00000412004 84 ntBASIC0.98□□□□□ -2.25
CUX2O14529 MTND4P28-201ENST00000426217 387 ntBASIC0.98□□□□□ -2.25
CUX2O14529 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
CUX2O14529 RNU6-63P-201ENST00000516690 95 ntBASIC0.98□□□□□ -2.25
CUX2O14529 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.98□□□□□ -2.25
CUX2O14529 AC060780.3-201ENST00000589464 80 ntBASIC0.98□□□□□ -2.25
CUX2O14529 Y_RNA.577-201ENST00000384794 101 ntBASIC0.97□□□□□ -2.25
CUX2O14529 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.97□□□□□ -2.25
CUX2O14529 Y_RNA.605-201ENST00000410577 105 ntBASIC0.97□□□□□ -2.25
CUX2O14529 MTND5P15-201ENST00000434246 349 ntBASIC0.97□□□□□ -2.25
CUX2O14529 AC245047.7-201ENST00000440265 293 ntBASIC0.97□□□□□ -2.25
CUX2O14529 PRDX4P1-201ENST00000507189 574 ntBASIC0.97□□□□□ -2.25
CUX2O14529 SNORA70.12-201ENST00000516084 153 ntBASIC0.97□□□□□ -2.25
CUX2O14529 RNU6-758P-201ENST00000516292 89 ntBASIC0.97□□□□□ -2.25
CUX2O14529 RNU6-1096P-201ENST00000517089 102 ntBASIC0.97□□□□□ -2.25
CUX2O14529 U6atac.1-201ENST00000616025 117 ntBASIC0.97□□□□□ -2.25
CUX2O14529 SNORD68-201ENST00000363214 84 ntBASIC0.96□□□□□ -2.26
CUX2O14529 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.96□□□□□ -2.26
CUX2O14529 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
CUX2O14529 AC104332.1-201ENST00000440471 797 ntBASIC0.96□□□□□ -2.26
CUX2O14529 RNU6-917P-201ENST00000516294 104 ntBASIC0.96□□□□□ -2.26
CUX2O14529 MTND4LP26-201ENST00000518144 282 ntBASIC0.96□□□□□ -2.26
CUX2O14529 AP003484.1-201ENST00000530974 250 ntBASIC0.96□□□□□ -2.26
CUX2O14529 AP002001.1-203ENST00000534002 267 ntBASIC0.96□□□□□ -2.26
CUX2O14529 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.96□□□□□ -2.26
CUX2O14529 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
CUX2O14529 MIR409-201ENST00000362237 79 ntBASIC0.95□□□□□ -2.26
CUX2O14529 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
CUX2O14529 RNU6-833P-201ENST00000363486 107 ntBASIC0.95□□□□□ -2.26
CUX2O14529 RNU5A-5P-201ENST00000411054 116 ntBASIC0.95□□□□□ -2.26
CUX2O14529 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.95□□□□□ -2.26
CUX2O14529 AL117336.2-201ENST00000602435 335 ntBASIC0.95□□□□□ -2.26
CUX2O14529 AC005828.6-201ENST00000606610 232 ntBASIC0.95□□□□□ -2.26
CUX2O14529 AL669831.3-213ENST00000636676 183 ntBASIC0.95□□□□□ -2.26
CUX2O14529 RNU6-1084P-201ENST00000362498 107 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU6-626P-201ENST00000363354 107 ntBASIC0.94□□□□□ -2.26
CUX2O14529 Y_RNA.160-201ENST00000363677 92 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU6-926P-201ENST00000384075 107 ntBASIC0.94□□□□□ -2.26
CUX2O14529 SNORA80D-201ENST00000384488 135 ntBASIC0.94□□□□□ -2.26
CUX2O14529 MT-TL1-201ENST00000386347 75 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU6-876P-201ENST00000391295 104 ntBASIC0.94□□□□□ -2.26
CUX2O14529 MTND1P4-201ENST00000435196 415 ntBASIC0.94□□□□□ -2.26
CUX2O14529 AC002429.1-201ENST00000437672 148 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU7-169P-201ENST00000459456 61 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU6-1116P-201ENST00000517269 99 ntBASIC0.94□□□□□ -2.26
CUX2O14529 RNU6-324P-201ENST00000363957 106 ntBASIC0.93□□□□□ -2.26
CUX2O14529 RNU6-117P-201ENST00000365415 107 ntBASIC0.93□□□□□ -2.26
CUX2O14529 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.93□□□□□ -2.26
CUX2O14529 AL354751.2-201ENST00000415471 210 ntBASIC0.93□□□□□ -2.26
CUX2O14529 ELOCP24-201ENST00000456370 334 ntBASIC0.93□□□□□ -2.26
CUX2O14529 Y_RNA.635-201ENST00000459041 101 ntBASIC0.93□□□□□ -2.26
CUX2O14529 AC104692.1-201ENST00000472406 90 ntBASIC0.93□□□□□ -2.26
CUX2O14529 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
CUX2O14529 RNU6-1213P-201ENST00000517075 94 ntBASIC0.93□□□□□ -2.26
CUX2O14529 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CUX2O14529 AC027279.3-201ENST00000625055 122 ntBASIC0.93□□□□□ -2.26
CUX2O14529 MIRLET7C-201ENST00000362160 84 ntBASIC0.92□□□□□ -2.26
CUX2O14529 Y_RNA.124-201ENST00000363339 93 ntBASIC0.92□□□□□ -2.26
CUX2O14529 RNU6-961P-201ENST00000363893 105 ntBASIC0.92□□□□□ -2.26
CUX2O14529 RNU4-14P-201ENST00000410858 122 ntBASIC0.92□□□□□ -2.26
CUX2O14529 MLLT10P1-201ENST00000418346 262 ntBASIC0.92□□□□□ -2.26
CUX2O14529 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.92□□□□□ -2.26
CUX2O14529 FGF7P6-202ENST00000451282 293 ntBASIC0.92□□□□□ -2.26
CUX2O14529 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
CUX2O14529 RNU6-470P-201ENST00000515954 104 ntBASIC0.92□□□□□ -2.26
CUX2O14529 SNORD79.1-201ENST00000516069 84 ntBASIC0.92□□□□□ -2.26
CUX2O14529 RNU6-1337P-201ENST00000516525 95 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AC023442.1-201ENST00000531247 422 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AC136932.1-201ENST00000574771 208 ntBASIC0.92□□□□□ -2.26
CUX2O14529 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.92□□□□□ -2.26
CUX2O14529 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AC092794.1-201ENST00000612734 582 ntBASIC0.92□□□□□ -2.26
CUX2O14529 AC098679.4-201ENST00000624241 654 ntBASIC0.92□□□□□ -2.26
CUX2O14529 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CUX2O14529 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
CUX2O14529 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms