Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC092954.2-201ENST00000609103 430 ntBASIC-0.21□□□□□ -2.44
TRAV1-1A0A0B4J248 SNORA9.1-201ENST00000362412 131 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-596P-201ENST00000365395 98 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-187P-201ENST00000384139 106 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-125P-201ENST00000384505 107 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR938-201ENST00000401216 83 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 MTCO2P27-201ENST00000420740 428 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AC092447.3-201ENST00000426027 686 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AC040904.1-201ENST00000590850 223 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AC010525.2-201ENST00000590920 195 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AP000753.3-201ENST00000604083 169 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 AC005014.3-201ENST00000605985 190 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 MIR6759-201ENST00000638110 65 ntBASIC-0.22□□□□□ -2.44
TRAV1-1A0A0B4J248 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-595P-201ENST00000363944 107 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORA2A-201ENST00000383885 135 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR517A-201ENST00000385001 87 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 MLLT10P1-201ENST00000418346 262 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 USMG5P1-201ENST00000425964 177 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 USP9YP16-201ENST00000430287 407 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 USP9YP23-201ENST00000455085 407 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 U8.19-201ENST00000459095 133 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 U8.22-201ENST00000459141 133 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 AC083904.1-201ENST00000487828 231 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RPL17P19-201ENST00000489069 552 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU7-129P-201ENST00000516128 62 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 MTND1P7-201ENST00000632801 297 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR3674-201ENST00000636576 68 ntBASIC-0.23□□□□□ -2.45
TRAV1-1A0A0B4J248 U8.7-201ENST00000364940 136 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORA69-201ENST00000383895 132 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-648P-201ENST00000410190 107 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 AC090844.1-201ENST00000422019 156 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 HMGN1P33-201ENST00000432945 451 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 SNRPGP14-201ENST00000435400 219 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU7-102P-201ENST00000458948 62 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU2-13P-201ENST00000515909 113 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-848P-201ENST00000515948 107 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-617P-201ENST00000516147 107 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-473P-201ENST00000516164 107 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNA5SP268-201ENST00000516828 124 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-835P-201ENST00000516974 104 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-89P-201ENST00000606519 100 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 uc_338.4-201ENST00000616635 176 ntBASIC-0.24□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORA72.1-201ENST00000363485 129 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORA51.10-201ENST00000384418 136 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR610-201ENST00000385139 96 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-131P-201ENST00000391144 107 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORA26-201ENST00000391286 122 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MTCO2P33-201ENST00000402100 465 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MTATP6P13-201ENST00000438531 667 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AL445567.1-201ENST00000439121 144 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AC005042.3-201ENST00000453230 174 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU4-49P-201ENST00000516080 140 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MTATP6P24-201ENST00000576835 677 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AC124303.1-201ENST00000605703 360 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 AC019193.3-201ENST00000609144 554 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR7107-201ENST00000611489 80 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
TRAV1-1A0A0B4J248 ZNF299P-201ENST00000406845 1804 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORD38C-201ENST00000384381 69 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 U8.17-201ENST00000391292 132 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 RNA5SP475-201ENST00000410568 110 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 MTND2P39-201ENST00000457230 764 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR5589-201ENST00000579442 60 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORD92-201ENST00000585078 85 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR4791-201ENST00000607666 84 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 AC240442.1-201ENST00000616055 283 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR499B-201ENST00000636498 73 ntBASIC-0.26□□□□□ -2.45
TRAV1-1A0A0B4J248 SNORD115-30-201ENST00000364117 82 ntBASIC-0.27□□□□□ -2.45
TRAV1-1A0A0B4J248 MIR125B2-201ENST00000385128 89 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms