Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-1012P-201ENST00000516606 109 ntBASIC0.65□□□□□ -2.31
KCNIP3Q9Y2W7 AC144568.1-201ENST00000520139 137 ntBASIC0.65□□□□□ -2.31
KCNIP3Q9Y2W7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
KCNIP3Q9Y2W7 AL442644.1-201ENST00000454390 3105 ntBASIC0.65□□□□□ -2.31
KCNIP3Q9Y2W7 AL391987.6-201ENST00000305671 199 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.160-201ENST00000363677 92 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 SNORD14.1-201ENST00000365609 90 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-20P-201ENST00000384106 107 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.446-201ENST00000384178 104 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 SNORA11.2-201ENST00000408318 127 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-436P-201ENST00000516171 114 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 RNU7-43P-201ENST00000516554 64 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 SNORD45.4-201ENST00000516629 73 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 MTND4LP26-201ENST00000518144 282 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 MIR4764-201ENST00000580680 88 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 MIR5690-201ENST00000583739 73 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 AC005972.2-201ENST00000604690 348 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 TPTEP1-208ENST00000636884 213 ntBASIC0.64□□□□□ -2.31
KCNIP3Q9Y2W7 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-890P-201ENST00000384121 107 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 SNORA72-201ENST00000384339 132 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 HMGN2P32-201ENST00000444648 269 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 HMGN1P7-201ENST00000491722 313 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RN7SKP164-201ENST00000516138 266 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-155P-201ENST00000516347 100 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-911P-201ENST00000516523 104 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 AC131055.1-201ENST00000584626 316 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 RBM11P1-201ENST00000604951 799 ntBASIC0.63□□□□□ -2.31
KCNIP3Q9Y2W7 SNORA25.3-201ENST00000363205 127 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-626P-201ENST00000363354 107 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-324P-201ENST00000363957 106 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.230-201ENST00000364348 109 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.599-201ENST00000410489 109 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RPL30P15-201ENST00000457129 321 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 PRDX4P1-201ENST00000507189 574 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-966P-201ENST00000516479 104 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 SNORA18.7-201ENST00000516910 131 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 MIR3945-201ENST00000581853 98 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 AC022306.2-201ENST00000617563 647 ntBASIC0.62□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 SNORD81.2-201ENST00000365153 76 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-131P-201ENST00000391144 107 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-192P-201ENST00000391253 100 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 MTND1P2-201ENST00000430604 821 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AL591806.2-201ENST00000433122 173 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 RPL23AP94-201ENST00000512518 302 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-470P-201ENST00000515954 104 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AC022441.3-201ENST00000605737 136 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 U2.1-201ENST00000618978 145 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 AC138305.3-201ENST00000624988 240 ntBASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.61□□□□□ -2.31
KCNIP3Q9Y2W7 SNORD50B-201ENST00000364995 70 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 MT-TL1-201ENST00000386347 75 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 MLLT10P1-201ENST00000418346 262 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 SNORA59A-201ENST00000459326 152 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 RNU7-169P-201ENST00000459456 61 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 COX6CP14-201ENST00000469580 174 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 MIR4698-201ENST00000577795 80 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 MIR4659A-201ENST00000580269 81 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 AC011476.5-201ENST00000615594 130 ntBASIC0.6□□□□□ -2.31
KCNIP3Q9Y2W7 RNY3P11-201ENST00000364153 102 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.474-201ENST00000384341 102 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 FGF7P8-201ENST00000402994 292 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.605-201ENST00000410577 105 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 AL390729.2-201ENST00000416137 156 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 AC108667.1-201ENST00000428618 249 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 SNRPGP10-201ENST00000432323 225 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 U6.92-201ENST00000636464 89 ntBASIC0.59□□□□□ -2.31
KCNIP3Q9Y2W7 MIR378A-201ENST00000362177 66 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.27-201ENST00000362540 103 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 RNU6-1323P-201ENST00000384025 107 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 Y_RNA.570-201ENST00000384750 101 ntBASIC0.58□□□□□ -2.32
KCNIP3Q9Y2W7 MIR628-201ENST00000385229 95 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms