Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC093023.1-201ENST00000547375 507 ntBASIC-1.42□□□□□ -2.64
SCN11AQ9UI33 AC010332.2-201ENST00000613083 1904 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 RNU6-336P-201ENST00000364891 107 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 MIR9-2-201ENST00000384838 87 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 MIR570-201ENST00000384917 97 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 SNORA25.13-201ENST00000516395 103 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 AC040926.1-201ENST00000530195 238 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 AC011458.1-201ENST00000604034 617 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 MIR4791-201ENST00000607666 84 ntBASIC-1.43□□□□□ -2.64
SCN11AQ9UI33 RNU6-490P-201ENST00000362985 107 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 SNORD115-44-201ENST00000365391 82 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNU6-245P-201ENST00000384020 107 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 MTND1P11-201ENST00000456661 876 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AC010598.1-201ENST00000510378 103 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNA5SP54-201ENST00000516951 92 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AC023632.1-201ENST00000518463 375 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 MIR8055-201ENST00000610739 97 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNU6-511P-201ENST00000363496 107 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 SNORD38C-201ENST00000384381 69 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 MRPS10P1-201ENST00000448483 130 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 RNU2-13P-201ENST00000515909 113 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 MIR3912-201ENST00000577566 105 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 AP001836.1-201ENST00000604675 523 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 SNORA43.4-201ENST00000629559 138 ntBASIC-1.44□□□□□ -2.64
SCN11AQ9UI33 SNORA36A-201ENST00000384221 132 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 RNU6-376P-201ENST00000384731 106 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 SNORD64-201ENST00000386683 67 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 SNORD65.1-201ENST00000390889 71 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 U8.17-201ENST00000391292 132 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 SNORD93-201ENST00000408813 74 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 AL390729.2-201ENST00000416137 156 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 MTATP6P17-201ENST00000431030 672 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 SNORD38.3-201ENST00000516599 73 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 AC008873.1-201ENST00000625051 138 ntBASIC-1.45□□□□□ -2.64
SCN11AQ9UI33 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 MIR181B2-201ENST00000385004 89 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 RNU6-847P-201ENST00000411115 108 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 AF186996.7-201ENST00000492781 209 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 AC021146.9-201ENST00000512503 156 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 RNU6-765P-201ENST00000516916 99 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 AL139418.1-201ENST00000613613 177 ntBASIC-1.46□□□□□ -2.64
SCN11AQ9UI33 SNORA1.2-201ENST00000365189 134 ntBASIC-1.47□□□□□ -2.64
SCN11AQ9UI33 RNA5SP20-201ENST00000515976 84 ntBASIC-1.47□□□□□ -2.64
SCN11AQ9UI33 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.47□□□□□ -2.64
SCN11AQ9UI33 AL354950.2-201ENST00000617939 290 ntBASIC-1.47□□□□□ -2.64
SCN11AQ9UI33 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 AC090844.1-201ENST00000422019 156 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 AC091959.1-201ENST00000495857 238 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 MTND5P34-201ENST00000568888 325 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 SNORD11B-201ENST00000607707 90 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 AF250324.2-201ENST00000608299 610 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 AC126544.2-201ENST00000625174 749 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 MIR382-201ENST00000637119 76 ntBASIC-1.47□□□□□ -2.65
SCN11AQ9UI33 SNORD56B-201ENST00000384713 71 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 SNORD41.1-201ENST00000391000 69 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 RNU6-830P-201ENST00000516353 107 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 SNORD45.4-201ENST00000516629 73 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 MIR3115-201ENST00000577915 68 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 AC121334.2-201ENST00000605387 271 ntBASIC-1.48□□□□□ -2.65
SCN11AQ9UI33 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 RNU6-324P-201ENST00000363957 106 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 SNORD114-29-201ENST00000364819 70 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 RNU6-702P-201ENST00000364982 107 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 MIR320C1-201ENST00000408566 88 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC010655.3-201ENST00000478818 450 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 RNA5SP33-201ENST00000516687 98 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 RNU7-188P-201ENST00000517063 64 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 MIR4423-201ENST00000580922 80 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC099785.1-201ENST00000605697 437 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 MIR6082-201ENST00000613604 109 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AL158050.1-201ENST00000416077 457 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 USP9YP21-201ENST00000420603 432 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 CALM2P2-201ENST00000428512 440 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 MTCO2P11-201ENST00000431069 680 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC244505.6-201ENST00000452829 130 ntBASIC-1.49□□□□□ -2.65
SCN11AQ9UI33 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms