Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNORD116-11-201ENST00000383882 92 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 MTCO3P40-201ENST00000392516 676 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 MIR190B-201ENST00000401119 79 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 SNRPGP10-201ENST00000432323 225 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 U8.22-201ENST00000459141 133 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 RNU6-237P-201ENST00000515985 71 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 RNA5SP94-201ENST00000516917 108 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 MIR4804-201ENST00000581683 73 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 AC121247.2-201ENST00000604776 136 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 AL359757.2-201ENST00000624309 274 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 MIR924-201ENST00000638017 53 ntBASIC-0.02□□□□□ -2.41
NKX6-2Q9C056 MIR377-201ENST00000362145 69 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 RNU6-596P-201ENST00000365395 98 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 USP9YP30-201ENST00000430729 455 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AC093534.1-201ENST00000504977 132 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AC010424.1-201ENST00000506336 297 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AC069113.3-201ENST00000521019 150 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AC006362.1-201ENST00000567392 174 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 MIR3942-201ENST00000585264 109 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 RAC1P9-201ENST00000604990 392 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 DISC2.1-201ENST00000612827 205 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 MIR8070-201ENST00000616510 88 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 AL359880.1-201ENST00000621879 266 ntBASIC-0.03□□□□□ -2.41
NKX6-2Q9C056 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 RNU6-874P-201ENST00000362390 105 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 RNU6-842P-201ENST00000384269 107 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 SNORA51.10-201ENST00000384418 136 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MTCO2P33-201ENST00000402100 465 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MIR4676-201ENST00000583078 72 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 AP000753.3-201ENST00000604083 169 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 AC078938.1-201ENST00000620993 318 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MIR4315-1-201ENST00000636800 73 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MIR4315-2-201ENST00000640925 73 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 MTND5P26-201ENST00000426018 1752 ntBASIC-0.04□□□□□ -2.42
NKX6-2Q9C056 SNORD14E-201ENST00000364009 85 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 SNORA25.9-201ENST00000365087 128 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 RNU6-318P-201ENST00000384283 103 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 SNORD38C-201ENST00000384381 69 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 MT-TN-201ENST00000387400 73 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 DEFB108C-201ENST00000400154 252 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 RNU2-70P-201ENST00000410718 179 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 MTCO2P27-201ENST00000420740 428 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 RNU2-12P-201ENST00000517216 168 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 EIF1P4-201ENST00000572664 335 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 AL162413.1-201ENST00000603198 110 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 AC005972.2-201ENST00000604690 348 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 AC020891.4-201ENST00000605745 93 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 uc_338.16-201ENST00000621804 95 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 AC090582.1-201ENST00000636321 199 ntBASIC-0.05□□□□□ -2.42
NKX6-2Q9C056 RNU6-580P-201ENST00000365159 107 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 SNORA8.2-201ENST00000384372 139 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 AL031003.1-201ENST00000404229 172 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 AL139396.1-201ENST00000421137 167 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 AC022616.4-201ENST00000522985 181 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 MIR5701-3-201ENST00000578890 82 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 MIR5701-1-201ENST00000585138 82 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 MIR5701-2-201ENST00000615634 82 ntBASIC-0.06□□□□□ -2.42
NKX6-2Q9C056 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-451P-201ENST00000362921 107 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 SNORD118-201ENST00000363593 134 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-483P-201ENST00000384088 108 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-125P-201ENST00000384505 107 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-700P-201ENST00000391043 107 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-332P-201ENST00000391193 108 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-908P-201ENST00000410160 94 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 HMGN1P10-201ENST00000474557 553 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU6-863P-201ENST00000515989 104 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 RNU1-54P-201ENST00000517181 120 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 AC005014.2-201ENST00000607795 599 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms