Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 U4.5-201ENST00000617137 123 ntBASIC0.67□□□□□ -2.3
RPRD1AQ96P16 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RPRD1AQ96P16 RNU6-1301P-201ENST00000362724 104 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 Y_RNA.354-201ENST00000365448 111 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 Y_RNA.404-201ENST00000383978 102 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 Y_RNA.621-201ENST00000411065 96 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 AL589823.1-201ENST00000429577 183 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 FABP5P4-201ENST00000437203 171 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 RPS20P10-201ENST00000451209 253 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 AC092989.1-201ENST00000481235 277 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 RNU2-12P-201ENST00000517216 168 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR4762-201ENST00000585261 75 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR1244-1-201ENST00000612829 85 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 AC090517.2-201ENST00000614966 680 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 AC007014.2-201ENST00000615581 479 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR6515-201ENST00000619843 57 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR1244-3-201ENST00000635744 85 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR1244-2-201ENST00000636449 85 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR1244-4-202ENST00000636813 85 ntBASIC0.66□□□□□ -2.3
RPRD1AQ96P16 MIR103A2-201ENST00000362154 78 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 RNU6-601P-201ENST00000384540 107 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 MIR489-201ENST00000384923 84 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 MIR516B2-201ENST00000385190 85 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 MIR1185-1-201ENST00000408598 86 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 MTND3P10-201ENST00000450967 341 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 AC055872.1-201ENST00000570978 278 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 SEPT14P17-201ENST00000617978 177 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.86-201ENST00000363020 111 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.339-201ENST00000365325 102 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 RNU6-1310P-201ENST00000384153 107 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 RNU6-1105P-201ENST00000384774 107 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 RNU6-510P-201ENST00000391239 108 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 RNU6-408P-201ENST00000515910 100 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.64□□□□□ -2.31
RPRD1AQ96P16 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 AC004467.1-201ENST00000615678 330 ntBASIC0.64□□□□□ -2.31
RPRD1AQ96P16 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
RPRD1AQ96P16 RNU6-623P-201ENST00000363143 105 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 RNY1-201ENST00000364228 113 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 RNU1-133P-201ENST00000364867 167 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 RNU6-1297P-201ENST00000384415 104 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 MTATP6P26-201ENST00000445926 662 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.63□□□□□ -2.31
RPRD1AQ96P16 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 SNORA74.3-201ENST00000517108 154 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 AC092794.2-201ENST00000620933 563 ntBASIC0.63□□□□□ -2.31
RPRD1AQ96P16 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.63□□□□□ -2.31
RPRD1AQ96P16 RNU6-961P-201ENST00000363893 105 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 MIR520C-201ENST00000385005 87 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 MIR548F1-201ENST00000408667 84 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 MTND3P8-201ENST00000412909 339 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 SNORA25.10-201ENST00000515926 124 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 RN7SKP164-201ENST00000516138 266 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 MTND4LP26-201ENST00000518144 282 ntBASIC0.62□□□□□ -2.31
RPRD1AQ96P16 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.88-201ENST00000363029 99 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.253-201ENST00000364562 112 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 AC117470.1-201ENST00000381974 330 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.482-201ENST00000384377 111 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 AL031003.1-201ENST00000404229 172 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 AC107399.1-201ENST00000451226 265 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 RPL17P19-201ENST00000489069 552 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.61□□□□□ -2.31
RPRD1AQ96P16 RNU6-718P-201ENST00000516166 105 ntBASIC0.61□□□□□ -2.31
RPRD1AQ96P16 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.61□□□□□ -2.31
RPRD1AQ96P16 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.172-201ENST00000363765 102 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 RNU6-99P-201ENST00000364721 107 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 MIR522-201ENST00000385071 87 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 MIR136-201ENST00000385207 82 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.6□□□□□ -2.31
RPRD1AQ96P16 RPL23AP50-201ENST00000434149 455 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.6□□□□□ -2.31
RPRD1AQ96P16 RNU6-1132P-201ENST00000459214 107 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 MIR2053-201ENST00000459295 91 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 SNORA18.7-201ENST00000516910 131 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 AC005899.2-201ENST00000584353 90 ntBASIC0.6□□□□□ -2.31
RPRD1AQ96P16 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.6□□□□□ -2.31
RPRD1AQ96P16 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.101-201ENST00000363154 102 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 Y_RNA.318-201ENST00000365131 97 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 SNORD14.1-201ENST00000365609 90 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 SNORD99-201ENST00000408612 74 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
RPRD1AQ96P16 AL390729.2-201ENST00000416137 156 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms