Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 RNU6-341P-201ENST00000516973 96 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 MIR4778-201ENST00000577635 80 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 MIR4423-201ENST00000580922 80 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 AC005176.2-201ENST00000596933 147 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 MIR6734-201ENST00000621166 68 ntBASIC1.28□□□□□ -2.2
SNRNP40Q96DI7 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 RNU6-626P-201ENST00000363354 107 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.419-201ENST00000384041 102 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 RNU6-136P-201ENST00000384663 107 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 MIR520G-201ENST00000385064 90 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 RPL39P38-201ENST00000467018 153 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AC093852.1-201ENST00000503587 266 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AC091178.2-201ENST00000584401 117 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 AP000648.3-201ENST00000623539 4507 ntBASIC1.27□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.61-201ENST00000362835 102 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 SNORA70.12-201ENST00000516084 153 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 RNA5SP168-201ENST00000516642 112 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AC011604.1-201ENST00000545978 196 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AC022441.3-201ENST00000605737 136 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AL121655.1-201ENST00000605811 308 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 AL160413.1-201ENST00000622780 310 ntBASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SNRNP40Q96DI7 MIR369-201ENST00000362155 70 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU6-199P-201ENST00000362954 107 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.80-201ENST00000362996 102 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.446-201ENST00000384178 104 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.485-201ENST00000384395 102 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.526-201ENST00000384572 110 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.535-201ENST00000384612 99 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNA5SP482-201ENST00000391269 118 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 AL031003.1-201ENST00000404229 172 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MIR1302-11-201ENST00000408051 138 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MIR1302-9-201ENST00000408365 138 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MIR1302-10-201ENST00000408734 138 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU2-61P-201ENST00000411069 191 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MCFD2P1-201ENST00000417812 300 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 HSPE1P13-201ENST00000451143 297 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 AL049830.1-201ENST00000468034 425 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 AC092991.1-201ENST00000477176 376 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU6-322P-201ENST00000516010 103 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU7-12P-201ENST00000516030 62 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU6-966P-201ENST00000516479 104 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 RNU6-922P-201ENST00000516753 99 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MIR1302-2-201ENST00000607096 138 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 AC007485.1-201ENST00000616755 206 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 AC090971.5-201ENST00000621102 293 ntBASIC1.25□□□□□ -2.21
SNRNP40Q96DI7 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 SNORA1B-201ENST00000362535 133 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.460-201ENST00000384255 102 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.462-201ENST00000384268 102 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 RNU6-505P-201ENST00000384427 107 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 PMCHL1-202ENST00000423102 261 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 CALM2P4-201ENST00000430810 426 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 MTND4P19-201ENST00000446659 478 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 AL513534.2-201ENST00000603836 250 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 AC006157.1-201ENST00000611750 366 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 AC068647.2-201ENST00000637380 353 ntBASIC1.24□□□□□ -2.21
SNRNP40Q96DI7 MTND4P29-201ENST00000503122 1372 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RNU6-324P-201ENST00000363957 106 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 MIR320A-201ENST00000385302 82 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RNU6-436P-201ENST00000516171 114 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RNU6-155P-201ENST00000516347 100 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RNU6-63P-201ENST00000516690 95 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RN7SKP295-201ENST00000517264 153 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 RPS29P30-201ENST00000600975 111 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 AC090574.1-201ENST00000623186 233 ntBASIC1.23□□□□□ -2.21
SNRNP40Q96DI7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.31-201ENST00000362574 102 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.813-201ENST00000364639 102 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.394-201ENST00000383942 103 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 U8.16-201ENST00000391279 133 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 AL451046.2-201ENST00000403074 277 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 RPEP5-201ENST00000441137 268 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 AL358944.1-201ENST00000528537 144 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 AC040926.1-201ENST00000530195 238 ntBASIC1.22□□□□□ -2.21
SNRNP40Q96DI7 Y_RNA.772-201ENST00000606692 102 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms