Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SNORD12B-201ENST00000410433 91 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 RNU6-994P-201ENST00000410507 111 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 AC098869.1-201ENST00000481627 292 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 AP003716.2-201ENST00000528260 108 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 MIR4764-201ENST00000580680 88 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
CTSL3PQ5NE16 RNU6-1050P-201ENST00000410388 107 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 MTND2P22-201ENST00000444325 1033 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 RNU6-1110P-201ENST00000516462 101 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 RNU7-43P-201ENST00000516554 64 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 SNORA18.7-201ENST00000516910 131 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 Y_RNA.708-201ENST00000516950 96 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 RMST_2.1-201ENST00000617263 136 ntBASIC0.53□□□□□ -2.32
CTSL3PQ5NE16 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 SNORD115-30-201ENST00000364117 82 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 RNU4-24P-201ENST00000364565 139 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.361-201ENST00000365515 120 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.554-201ENST00000384672 102 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.670-201ENST00000516255 105 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 AL512605.2-201ENST00000592972 256 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 AC006380.1-201ENST00000603598 186 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 RNU6-94P-201ENST00000607728 107 ntBASIC0.52□□□□□ -2.33
CTSL3PQ5NE16 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 RNU6-1084P-201ENST00000362498 107 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.796-201ENST00000364268 102 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.799-201ENST00000364992 102 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AC117470.1-201ENST00000381974 330 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 MLLT10P1-201ENST00000418346 262 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 RPS3AP52-201ENST00000435639 297 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 RN7SKP164-201ENST00000516138 266 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AC022616.4-201ENST00000522985 181 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 AC093027.1-201ENST00000546698 429 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
CTSL3PQ5NE16 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 RNU6-1301P-201ENST00000362724 104 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.118-201ENST00000363300 101 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.253-201ENST00000364562 112 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 RNU6-601P-201ENST00000384540 107 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 AL390729.2-201ENST00000416137 156 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 MRPS18CP6-201ENST00000423587 223 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 HMGN2P32-201ENST00000444648 269 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 RNU6-408P-201ENST00000515910 100 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 SNORD45.4-201ENST00000516629 73 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 MIR2355-201ENST00000517199 87 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 RNU2-12P-201ENST00000517216 168 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 AC005899.2-201ENST00000584353 90 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 Z83818.1-201ENST00000603584 150 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 AC009229.3-201ENST00000608056 282 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 MIR6515-201ENST00000619843 57 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CTSL3PQ5NE16 snoU2-30.1-201ENST00000365012 70 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 Y_RNA.453-201ENST00000384223 109 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 MIR548F5-201ENST00000408421 86 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 RPL7P42-201ENST00000481005 679 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 RNU6-307P-201ENST00000516743 106 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 RNU11-2P-201ENST00000516898 142 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 AC004467.1-201ENST00000615678 330 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 PISRT1.1-201ENST00000616930 107 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 AC092794.2-201ENST00000620933 563 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
CTSL3PQ5NE16 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 RNU1-119P-201ENST00000391122 165 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 RNU6-510P-201ENST00000391239 108 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AL031003.1-201ENST00000404229 172 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AC107399.1-201ENST00000451226 265 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 SNORD123-201ENST00000459473 70 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 RNU6-329P-201ENST00000459618 107 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AC036111.3-201ENST00000526389 112 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 MIR1244-1-201ENST00000612829 85 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 MIR1244-3-201ENST00000635744 85 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 MIR1244-2-201ENST00000636449 85 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 MIR1244-4-202ENST00000636813 85 ntBASIC0.48□□□□□ -2.33
CTSL3PQ5NE16 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CTSL3PQ5NE16 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
CTSL3PQ5NE16 RNU6-131P-201ENST00000391144 107 ntBASIC0.47□□□□□ -2.33
CTSL3PQ5NE16 MIR548K-201ENST00000408406 116 ntBASIC0.47□□□□□ -2.33
CTSL3PQ5NE16 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.47□□□□□ -2.33
CTSL3PQ5NE16 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms