Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
LMO4P61968 SNORA70.12-201ENST00000516084 153 ntBASIC1.67□□□□□ -2.14
LMO4P61968 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.67□□□□□ -2.14
LMO4P61968 MIR4753-201ENST00000585119 83 ntBASIC1.67□□□□□ -2.14
LMO4P61968 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LMO4P61968 Y_RNA.75-201ENST00000362927 97 ntBASIC1.66□□□□□ -2.14
LMO4P61968 RNU6-899P-201ENST00000363947 107 ntBASIC1.66□□□□□ -2.14
LMO4P61968 Y_RNA.272-201ENST00000364696 102 ntBASIC1.66□□□□□ -2.14
LMO4P61968 Y_RNA.293-201ENST00000364908 93 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SNORD31B-201ENST00000364977 69 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SNORD116-18-201ENST00000383961 92 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SNORA20B-201ENST00000384220 132 ntBASIC1.66□□□□□ -2.14
LMO4P61968 RNU6-975P-201ENST00000384296 105 ntBASIC1.66□□□□□ -2.14
LMO4P61968 Y_RNA.572-201ENST00000384757 98 ntBASIC1.66□□□□□ -2.14
LMO4P61968 MIR144-201ENST00000384886 86 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
LMO4P61968 MIR873-201ENST00000401120 77 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
LMO4P61968 SEPT7P4-201ENST00000437076 306 ntBASIC1.66□□□□□ -2.14
LMO4P61968 RPL23AP7-203ENST00000449021 469 ntBASIC1.66□□□□□ -2.14
LMO4P61968 AC016925.1-201ENST00000458303 298 ntBASIC1.66□□□□□ -2.14
LMO4P61968 RNU6-221P-201ENST00000459541 99 ntBASIC1.66□□□□□ -2.14
LMO4P61968 RNU6-295P-201ENST00000516901 104 ntBASIC1.66□□□□□ -2.14
LMO4P61968 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
LMO4P61968 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.66□□□□□ -2.14
LMO4P61968 snoZ196.1-201ENST00000625269 89 ntBASIC1.66□□□□□ -2.14
LMO4P61968 MIR1248-201ENST00000629190 106 ntBASIC1.66□□□□□ -2.14
LMO4P61968 AC132825.6-201ENST00000638861 357 ntBASIC1.66□□□□□ -2.14
LMO4P61968 AL159152.1-201ENST00000635019 2587 ntBASIC1.65□□□□□ -2.14
LMO4P61968 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LMO4P61968 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LMO4P61968 Y_RNA.23-201ENST00000362496 106 ntBASIC1.65□□□□□ -2.15
LMO4P61968 SNORA27.1-201ENST00000362604 124 ntBASIC1.65□□□□□ -2.15
LMO4P61968 SNORA16B-201ENST00000364674 135 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RNU6-275P-201ENST00000364910 107 ntBASIC1.65□□□□□ -2.15
LMO4P61968 SNORD116-13-201ENST00000384408 92 ntBASIC1.65□□□□□ -2.15
LMO4P61968 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
LMO4P61968 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
LMO4P61968 Y_RNA.580-201ENST00000391004 95 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RNU6-57P-201ENST00000411348 103 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RPS20P10-201ENST00000451209 253 ntBASIC1.65□□□□□ -2.15
LMO4P61968 HMGN2P23-201ENST00000456759 269 ntBASIC1.65□□□□□ -2.15
LMO4P61968 SNORD65B-201ENST00000459126 73 ntBASIC1.65□□□□□ -2.15
LMO4P61968 AC114982.1-201ENST00000469402 321 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RPS26P55-201ENST00000471178 356 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RN7SKP164-201ENST00000516138 266 ntBASIC1.65□□□□□ -2.15
LMO4P61968 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.65□□□□□ -2.15
LMO4P61968 AC121758.2-201ENST00000553271 193 ntBASIC1.65□□□□□ -2.15
LMO4P61968 MIR3684-201ENST00000579779 74 ntBASIC1.65□□□□□ -2.15
LMO4P61968 MIR5089-201ENST00000580047 84 ntBASIC1.65□□□□□ -2.15
LMO4P61968 AC004832.4-201ENST00000608952 331 ntBASIC1.65□□□□□ -2.15
LMO4P61968 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.65□□□□□ -2.15
LMO4P61968 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.15
LMO4P61968 AL596028.1-201ENST00000326971 197 ntBASIC1.64□□□□□ -2.15
LMO4P61968 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LMO4P61968 Y_RNA.24-201ENST00000362508 103 ntBASIC1.64□□□□□ -2.15
LMO4P61968 SNORD114-7-201ENST00000362520 77 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-1205P-201ENST00000363625 106 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-704P-201ENST00000364162 103 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU4-84P-201ENST00000364200 139 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-312P-201ENST00000364629 107 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-969P-201ENST00000383900 105 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-418P-201ENST00000384035 107 ntBASIC1.64□□□□□ -2.15
LMO4P61968 SNORA8.3-201ENST00000384679 139 ntBASIC1.64□□□□□ -2.15
LMO4P61968 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
LMO4P61968 MIR17-201ENST00000385012 84 ntBASIC1.64□□□□□ -2.15
LMO4P61968 MIR613-201ENST00000385248 95 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-482P-201ENST00000391068 107 ntBASIC1.64□□□□□ -2.15
LMO4P61968 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
LMO4P61968 AC016909.1-201ENST00000415916 166 ntBASIC1.64□□□□□ -2.15
LMO4P61968 AC074290.1-201ENST00000448883 135 ntBASIC1.64□□□□□ -2.15
LMO4P61968 SCARNA8-201ENST00000515924 131 ntBASIC1.64□□□□□ -2.15
LMO4P61968 Y_RNA.797-201ENST00000515977 94 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-991P-201ENST00000516168 107 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-1337P-201ENST00000516525 95 ntBASIC1.64□□□□□ -2.15
LMO4P61968 SNORA31.11-201ENST00000516528 139 ntBASIC1.64□□□□□ -2.15
LMO4P61968 RNU6-453P-201ENST00000516819 85 ntBASIC1.64□□□□□ -2.15
LMO4P61968 AC027419.1-201ENST00000522976 328 ntBASIC1.64□□□□□ -2.15
LMO4P61968 PRELID2P1-201ENST00000552837 301 ntBASIC1.64□□□□□ -2.15
LMO4P61968 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
LMO4P61968 Y_RNA.802-201ENST00000614892 130 ntBASIC1.64□□□□□ -2.15
LMO4P61968 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LMO4P61968 AC068647.2-201ENST00000637380 353 ntBASIC1.64□□□□□ -2.15
LMO4P61968 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LMO4P61968 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
LMO4P61968 Y_RNA.99-201ENST00000363138 105 ntBASIC1.63□□□□□ -2.15
LMO4P61968 U8.7-201ENST00000364940 136 ntBASIC1.63□□□□□ -2.15
LMO4P61968 SNORD113-1-201ENST00000365321 69 ntBASIC1.63□□□□□ -2.15
LMO4P61968 SNORA80E-201ENST00000384744 137 ntBASIC1.63□□□□□ -2.15
LMO4P61968 MIR526A2-201ENST00000390198 65 ntBASIC1.63□□□□□ -2.15
LMO4P61968 RNU6-578P-201ENST00000390980 103 ntBASIC1.63□□□□□ -2.15
LMO4P61968 MIR1262-201ENST00000408276 93 ntBASIC1.63□□□□□ -2.15
LMO4P61968 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.63□□□□□ -2.15
LMO4P61968 HSPE1P21-201ENST00000438283 308 ntBASIC1.63□□□□□ -2.15
LMO4P61968 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AC117454.1-201ENST00000491120 168 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AC005840.1-201ENST00000498412 377 ntBASIC1.63□□□□□ -2.15
LMO4P61968 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms