Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 RNU6-136P-201ENST00000384663 107 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 MIR215-201ENST00000384858 110 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 MIR873-201ENST00000401120 77 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 MTCO2P21-201ENST00000419780 677 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 AC104850.1-201ENST00000435940 476 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 Vault.3-201ENST00000516676 95 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 AC006600.1-201ENST00000572529 153 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 MIR3681-201ENST00000580089 72 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 MIR4791-201ENST00000607666 84 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 U7.6-201ENST00000610841 64 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 AL133173.2-201ENST00000614270 90 ntBASIC-1.14□□□□□ -2.59
CKS1BP61024 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 SNORD114-11-201ENST00000363738 75 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 SNORA25.7-201ENST00000364375 127 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 SNORD38C-201ENST00000384381 69 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 AL008987.1-201ENST00000415528 237 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 MCFD2P1-201ENST00000417812 300 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.15□□□□□ -2.59
CKS1BP61024 RNU6-329P-201ENST00000459618 107 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 PRDX4P1-201ENST00000507189 574 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 RNU6-107P-201ENST00000516643 102 ntBASIC-1.15□□□□□ -2.59
CKS1BP61024 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.16□□□□□ -2.59
CKS1BP61024 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 RNU6-606P-201ENST00000384721 111 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
CKS1BP61024 AL354751.2-201ENST00000415471 210 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
CKS1BP61024 RNU6-138P-201ENST00000515952 107 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 RNU6-830P-201ENST00000516353 107 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 AP001328.1-201ENST00000528550 176 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 AC064836.2-201ENST00000609491 462 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 MIR6740-201ENST00000618268 113 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 AL158209.2-201ENST00000619266 216 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.16□□□□□ -2.6
CKS1BP61024 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 SNORD50B-201ENST00000364995 70 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 SNORD28-201ENST00000384706 75 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 RNY1P7-201ENST00000384743 110 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 MIR153-2-201ENST00000385225 87 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 MIR1265-201ENST00000408444 86 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 RPL21P38-201ENST00000418090 167 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.17□□□□□ -2.6
CKS1BP61024 AC073464.1-201ENST00000429823 534 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 HSPE1P23-201ENST00000509838 286 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 LRRC34P1-201ENST00000542742 915 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 MIR4639-201ENST00000584938 69 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 MIR4436A-201ENST00000585278 85 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 AC006380.1-201ENST00000603598 186 ntBASIC-1.17□□□□□ -2.6
CKS1BP61024 SNORD114-14-201ENST00000362723 75 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 RNU6-108P-201ENST00000365558 107 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.18□□□□□ -2.6
CKS1BP61024 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.18□□□□□ -2.6
CKS1BP61024 IGKV1-22-201ENST00000524313 326 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 AC022878.1-201ENST00000530684 149 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 MIR5706-201ENST00000579841 80 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 PIGPP4-201ENST00000584447 307 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 AC125232.2-201ENST00000592457 143 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 Z94722.1-201ENST00000604328 474 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 AL136370.1-201ENST00000608166 691 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.18□□□□□ -2.6
CKS1BP61024 RNU6-501P-201ENST00000364072 100 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 RNU6-811P-201ENST00000384069 107 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 MIR518F-201ENST00000384973 87 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 RNU6-131P-201ENST00000391144 107 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 U8.17-201ENST00000391292 132 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 AC138749.4-201ENST00000563970 127 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 MIR3925-201ENST00000584674 77 ntBASIC-1.19□□□□□ -2.6
CKS1BP61024 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.19□□□□□ -2.6
CKS1BP61024 SNORD114-7-201ENST00000362520 77 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 RNU6-157P-201ENST00000383957 107 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 RNU6-159P-201ENST00000391080 106 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.2□□□□□ -2.6
CKS1BP61024 AL137161.1-201ENST00000532231 390 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.2□□□□□ -2.6
CKS1BP61024 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.2□□□□□ -2.6
CKS1BP61024 MIR378D2-201ENST00000580636 98 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 AL607023.1-201ENST00000620045 248 ntBASIC-1.2□□□□□ -2.6
CKS1BP61024 SNORA1.2-201ENST00000365189 134 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 RNU6-541P-201ENST00000384709 110 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 SNORA75.4-201ENST00000391278 119 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 RNU2-29P-201ENST00000410423 189 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 RNU6-847P-201ENST00000411115 108 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 AC090844.1-201ENST00000422019 156 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.21□□□□□ -2.6
CKS1BP61024 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.21□□□□□ -2.6
CKS1BP61024 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.21□□□□□ -2.6
CKS1BP61024 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 RNU4-68P-201ENST00000364314 141 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 MIR521-1-201ENST00000384902 87 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms