Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 DLGAP5P1-201ENST00000430307 464 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC018710.1-201ENST00000506509 158 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 RNU7-43P-201ENST00000516554 64 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 MIR4764-201ENST00000580680 88 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC005828.6-201ENST00000606610 232 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC240442.1-201ENST00000616055 283 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC092794.2-201ENST00000620933 563 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
BRCA1P38398 RNA5SP361-201ENST00000362686 118 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 Y_RNA.336-201ENST00000365307 109 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 Y_RNA.453-201ENST00000384223 109 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 Y_RNA.518-201ENST00000384552 113 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.5□□□□□ -2.33
BRCA1P38398 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.5□□□□□ -2.33
BRCA1P38398 RNU4-49P-201ENST00000516080 140 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 RNU1-54P-201ENST00000517181 120 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.5□□□□□ -2.33
BRCA1P38398 AC109635.3-201ENST00000529536 185 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.5□□□□□ -2.33
BRCA1P38398 AC018462.2-201ENST00000605375 395 ntBASIC0.5□□□□□ -2.33
BRCA1P38398 Y_RNA.405-201ENST00000383979 100 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 Y_RNA.451-201ENST00000384200 100 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 Y_RNA.524-201ENST00000384564 100 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 Y_RNA.561-201ENST00000384694 100 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 MIR329-1-201ENST00000385028 80 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 MIR605-201ENST00000385078 83 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 AC018448.1-201ENST00000552843 316 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 AL391903.3-201ENST00000612158 163 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 7SK.10-201ENST00000621414 298 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.49□□□□□ -2.33
BRCA1P38398 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.49□□□□□ -2.33
BRCA1P38398 AC005592.1-201ENST00000566527 1640 ntBASIC0.49□□□□□ -2.33
BRCA1P38398 RNY4P14-201ENST00000363656 96 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 RNU6-324P-201ENST00000363957 106 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 Y_RNA.471-201ENST00000384312 102 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 Y_RNA.473-201ENST00000384333 102 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 MIR1298-201ENST00000408783 112 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AL354751.2-201ENST00000415471 210 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AC092423.1-201ENST00000430165 186 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 RPEP5-201ENST00000441137 268 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AC100812.1-201ENST00000607622 580 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AL357075.2-201ENST00000614906 189 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 RNU6-99P-201ENST00000364721 107 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 CALM2P4-201ENST00000430810 426 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 SUMO1P2-201ENST00000452524 304 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA1P38398 AC022616.4-201ENST00000522985 181 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AC023442.1-201ENST00000531247 422 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 AC104465.1-201ENST00000611365 139 ntBASIC0.48□□□□□ -2.33
BRCA1P38398 Y_RNA.9-201ENST00000362354 101 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 RNU6-961P-201ENST00000363893 105 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 AC117470.1-201ENST00000381974 330 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 Y_RNA.404-201ENST00000383978 102 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 Y_RNA.436-201ENST00000384097 102 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 Y_RNA.554-201ENST00000384672 102 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
BRCA1P38398 AL162725.1-201ENST00000435405 301 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 AC104332.1-201ENST00000440471 797 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 MTND2P22-201ENST00000444325 1033 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 MTND1P17-201ENST00000448961 204 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 AP000870.1-201ENST00000472927 406 ntBASIC0.47□□□□□ -2.33
BRCA1P38398 Y_RNA.60-201ENST00000362831 98 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNA5SP264-201ENST00000363115 107 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 snoU2-30.1-201ENST00000365012 70 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU6-117P-201ENST00000365415 107 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 SNORA75.2-201ENST00000391138 150 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 SNORA75.3-201ENST00000391231 150 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNA5SP118-201ENST00000410385 109 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU5A-5P-201ENST00000411054 116 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 Z83846.1-201ENST00000446798 265 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC233266.1-201ENST00000454518 96 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 MIR4778-201ENST00000577635 80 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC242852.1-201ENST00000612151 96 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC244015.1-201ENST00000622301 99 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 SNORA25.3-201ENST00000363205 127 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU6-593P-201ENST00000364716 112 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 Y_RNA.498-201ENST00000384460 102 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 Y_RNA.557-201ENST00000384680 107 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 SNORA69.1-201ENST00000390904 137 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU2-16P-201ENST00000410712 136 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC074085.1-201ENST00000413598 418 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.46□□□□□ -2.34
BRCA1P38398 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.46□□□□□ -2.34
BRCA1P38398 MRPS10P1-201ENST00000448483 130 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 U8.19-201ENST00000459095 133 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 U8.22-201ENST00000459141 133 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU6-625P-201ENST00000459412 107 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC098869.1-201ENST00000481627 292 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RPS29P25-201ENST00000481709 171 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU6-911P-201ENST00000516523 104 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 RNU6-197P-201ENST00000516680 100 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.46□□□□□ -2.34
BRCA1P38398 AL355073.2-201ENST00000612106 557 ntBASIC0.46□□□□□ -2.34
BRCA1P38398 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.45□□□□□ -2.34
BRCA1P38398 RNU6-1301P-201ENST00000362724 104 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 Y_RNA.148-201ENST00000363557 117 ntBASIC0.45□□□□□ -2.34
BRCA1P38398 SNORD38C-201ENST00000384381 69 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms