Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 RPL23AP50-201ENST00000434149 455 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 SUMO1P2-201ENST00000452524 304 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 RNU6-1132P-201ENST00000459214 107 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 AC026782.1-201ENST00000512952 449 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 SNORA74.3-201ENST00000517108 154 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 AC245505.1-201ENST00000556398 224 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 MIR4790-201ENST00000577799 79 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 MIR4762-201ENST00000585261 75 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 RNU6-94P-201ENST00000607728 107 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 AC009229.3-201ENST00000608056 282 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 7SK.10-201ENST00000621414 298 ntBASIC0.42□□□□□ -2.34
SLC6A1P30531 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SLC6A1P30531 SNORD114-7-201ENST00000362520 77 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 Y_RNA.517-201ENST00000384551 106 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 RNA5SP475-201ENST00000410568 110 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 AL353997.1-201ENST00000432936 108 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.41□□□□□ -2.34
SLC6A1P30531 U7.7-201ENST00000459276 60 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 MTND5P5-201ENST00000503764 376 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 RNU6-1337P-201ENST00000516525 95 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 MIR4711-201ENST00000578274 70 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.41□□□□□ -2.34
SLC6A1P30531 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
SLC6A1P30531 Y_RNA.89-201ENST00000363031 102 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 RNY4P14-201ENST00000363656 96 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 Y_RNA.194-201ENST00000363985 102 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 SNORD115-30-201ENST00000364117 82 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 Y_RNA.358-201ENST00000365491 99 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 SNORD116-2-201ENST00000384274 95 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 SNORD116-6-201ENST00000384711 96 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 MIR520C-201ENST00000385005 87 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 MIR181A1-201ENST00000385026 110 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SLC6A1P30531 Y_RNA.594-201ENST00000410373 140 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 Y_RNA.621-201ENST00000411065 96 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 MTCYBP10-201ENST00000424905 650 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 UBE2V1P7-201ENST00000446395 340 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.4□□□□□ -2.35
SLC6A1P30531 AC024909.2-201ENST00000553035 286 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 AC008133.2-201ENST00000624540 351 ntBASIC0.4□□□□□ -2.35
SLC6A1P30531 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.4□□□□□ -2.35
SLC6A1P30531 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
SLC6A1P30531 Y_RNA.157-201ENST00000363638 102 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 SNORD14.1-201ENST00000365609 90 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 AC117470.1-201ENST00000381974 330 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 Y_RNA.554-201ENST00000384672 102 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 AL139396.1-201ENST00000421137 167 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 RPS29P25-201ENST00000481709 171 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 RNU4-49P-201ENST00000516080 140 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 Y_RNA.670-201ENST00000516255 105 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 Y_RNA.682-201ENST00000516457 100 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 RNU6-1110P-201ENST00000516462 101 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 RNU6-1016P-201ENST00000516689 94 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 SNORA18.7-201ENST00000516910 131 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 RNU2-12P-201ENST00000517216 168 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 AC036111.3-201ENST00000526389 112 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.39□□□□□ -2.35
SLC6A1P30531 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 MIR4764-201ENST00000580680 88 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 AC025627.3-201ENST00000582078 182 ntBASIC0.39□□□□□ -2.35
SLC6A1P30531 Y_RNA.2-201ENST00000362330 96 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 Y_RNA.9-201ENST00000362354 101 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 RNA5SP48-201ENST00000363969 126 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 Y_RNA.253-201ENST00000364562 112 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 MIR136-201ENST00000385207 82 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 RNA5SP118-201ENST00000410385 109 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 SNORD12B-201ENST00000410433 91 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 AC074085.1-201ENST00000413598 418 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 AL390729.2-201ENST00000416137 156 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 AC244098.3-201ENST00000424803 96 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 SNORA25.10-201ENST00000515926 124 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
SLC6A1P30531 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.38□□□□□ -2.35
SLC6A1P30531 RNU6-1301P-201ENST00000362724 104 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 Y_RNA.450-201ENST00000384198 113 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 MIR522-201ENST00000385071 87 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.37□□□□□ -2.35
SLC6A1P30531 RNU7-43P-201ENST00000516554 64 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC055872.1-201ENST00000570978 278 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC005730.3-201ENST00000583067 366 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC018638.8-201ENST00000588755 281 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 AC015540.1-201ENST00000615828 501 ntBASIC0.37□□□□□ -2.35
SLC6A1P30531 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.37□□□□□ -2.35
SLC6A1P30531 Y_RNA.172-201ENST00000363765 102 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 RNU6-654P-201ENST00000364373 107 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 Y_RNA.295-201ENST00000364918 102 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 MIR15B-201ENST00000385045 98 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 RNU1-119P-201ENST00000391122 165 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 MIR1302-7-201ENST00000408841 72 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 RNU6-1050P-201ENST00000410388 107 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 AL392103.1-201ENST00000447000 198 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 SNORD123-201ENST00000459473 70 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms