Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
ATF4P18848 AL162274.2-201ENST00000614406 332 ntBASIC2.59□□□□□ -1.99
ATF4P18848 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.59□□□□□ -1.99
ATF4P18848 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ATF4P18848 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATF4P18848 Y_RNA.8-201ENST00000362353 102 ntBASIC2.58□□□□□ -2
ATF4P18848 SNORD14E-201ENST00000364009 85 ntBASIC2.58□□□□□ -2
ATF4P18848 SNORA4.2-201ENST00000365313 147 ntBASIC2.58□□□□□ -2
ATF4P18848 HSPE1P9-201ENST00000440046 311 ntBASIC2.58□□□□□ -2
ATF4P18848 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.58□□□□□ -2
ATF4P18848 SNORA70.24-201ENST00000517233 118 ntBASIC2.58□□□□□ -2
ATF4P18848 AC107016.2-201ENST00000547968 190 ntBASIC2.58□□□□□ -2
ATF4P18848 AL160236.1-201ENST00000556317 195 ntBASIC2.58□□□□□ -2
ATF4P18848 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.58□□□□□ -2
ATF4P18848 MTND1P7-201ENST00000632801 297 ntBASIC2.58□□□□□ -2
ATF4P18848 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATF4P18848 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ATF4P18848 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ATF4P18848 RNA5SP276-201ENST00000362580 94 ntBASIC2.57□□□□□ -2
ATF4P18848 Y_RNA.521-201ENST00000384560 114 ntBASIC2.57□□□□□ -2
ATF4P18848 RNU6-1031P-201ENST00000384773 107 ntBASIC2.57□□□□□ -2
ATF4P18848 MIR491-201ENST00000384877 84 ntBASIC2.57□□□□□ -2
ATF4P18848 AL603908.1-201ENST00000406098 201 ntBASIC2.57□□□□□ -2
ATF4P18848 MIR548M-201ENST00000408260 86 ntBASIC2.57□□□□□ -2
ATF4P18848 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
ATF4P18848 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.57□□□□□ -2
ATF4P18848 SNORA74D-201ENST00000516404 141 ntBASIC2.57□□□□□ -2
ATF4P18848 RNA5SP367-201ENST00000516557 118 ntBASIC2.57□□□□□ -2
ATF4P18848 RNU6-365P-201ENST00000517113 106 ntBASIC2.57□□□□□ -2
ATF4P18848 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.57□□□□□ -2
ATF4P18848 MIR4287-201ENST00000579398 78 ntBASIC2.57□□□□□ -2
ATF4P18848 AC008507.4-201ENST00000585464 127 ntBASIC2.57□□□□□ -2
ATF4P18848 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
ATF4P18848 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.57□□□□□ -2
ATF4P18848 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.57□□□□□ -2
ATF4P18848 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATF4P18848 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
ATF4P18848 RNU6-449P-201ENST00000383914 107 ntBASIC2.56□□□□□ -2
ATF4P18848 RNU6-484P-201ENST00000384016 107 ntBASIC2.56□□□□□ -2
ATF4P18848 RNU6-804P-201ENST00000384286 107 ntBASIC2.56□□□□□ -2
ATF4P18848 RNU6-163P-201ENST00000384396 106 ntBASIC2.56□□□□□ -2
ATF4P18848 RNU6-360P-201ENST00000390944 104 ntBASIC2.56□□□□□ -2
ATF4P18848 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.56□□□□□ -2
ATF4P18848 HMGN2P32-201ENST00000444648 269 ntBASIC2.56□□□□□ -2
ATF4P18848 CYCTP-201ENST00000504253 315 ntBASIC2.56□□□□□ -2
ATF4P18848 MRPS17P9-201ENST00000511924 393 ntBASIC2.56□□□□□ -2
ATF4P18848 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.56□□□□□ -2
ATF4P18848 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
ATF4P18848 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
ATF4P18848 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
ATF4P18848 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ATF4P18848 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
ATF4P18848 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
ATF4P18848 RNU1-138P-201ENST00000384093 164 ntBASIC2.55□□□□□ -2
ATF4P18848 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
ATF4P18848 AC025518.1-201ENST00000479856 347 ntBASIC2.55□□□□□ -2
ATF4P18848 SNORD45.4-201ENST00000516629 73 ntBASIC2.55□□□□□ -2
ATF4P18848 SNORA31.17-201ENST00000516953 127 ntBASIC2.55□□□□□ -2
ATF4P18848 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.55□□□□□ -2
ATF4P18848 MIR378D2-201ENST00000580636 98 ntBASIC2.55□□□□□ -2
ATF4P18848 AC120024.3-201ENST00000603167 156 ntBASIC2.55□□□□□ -2
ATF4P18848 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.55□□□□□ -2
ATF4P18848 uc_338.1-201ENST00000612113 180 ntBASIC2.55□□□□□ -2
ATF4P18848 AC021753.1-201ENST00000635724 168 ntBASIC2.55□□□□□ -2
ATF4P18848 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.54□□□□□ -2
ATF4P18848 SNORD50B-201ENST00000364995 70 ntBASIC2.54□□□□□ -2
ATF4P18848 Y_RNA.336-201ENST00000365307 109 ntBASIC2.54□□□□□ -2
ATF4P18848 SNORD116-18-201ENST00000383961 92 ntBASIC2.54□□□□□ -2
ATF4P18848 RNVU1-14-201ENST00000384770 164 ntBASIC2.54□□□□□ -2
ATF4P18848 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.54□□□□□ -2
ATF4P18848 SNORD116-25-201ENST00000516517 92 ntBASIC2.54□□□□□ -2
ATF4P18848 SCARNA16.3-201ENST00000516595 184 ntBASIC2.54□□□□□ -2
ATF4P18848 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.54□□□□□ -2
ATF4P18848 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.54□□□□□ -2
ATF4P18848 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
ATF4P18848 MIR3922-201ENST00000585192 84 ntBASIC2.54□□□□□ -2
ATF4P18848 AC027279.3-201ENST00000625055 122 ntBASIC2.54□□□□□ -2
ATF4P18848 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.54□□□□□ -2
ATF4P18848 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.53□□□□□ -2
ATF4P18848 Y_RNA.634-201ENST00000364811 113 ntBASIC2.53□□□□□ -2
ATF4P18848 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
ATF4P18848 Y_RNA.486-201ENST00000384398 107 ntBASIC2.53□□□□□ -2
ATF4P18848 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
ATF4P18848 RNU6-504P-201ENST00000516568 104 ntBASIC2.53□□□□□ -2
ATF4P18848 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
ATF4P18848 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ATF4P18848 RNU4-35P-201ENST00000362588 141 ntBASIC2.52□□□□□ -2.01
ATF4P18848 Y_RNA.398-201ENST00000383952 99 ntBASIC2.52□□□□□ -2.01
ATF4P18848 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
ATF4P18848 SNORD67-201ENST00000390833 111 ntBASIC2.52□□□□□ -2.01
ATF4P18848 SNORD72-201ENST00000390994 80 ntBASIC2.52□□□□□ -2.01
ATF4P18848 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
ATF4P18848 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.52□□□□□ -2.01
ATF4P18848 AC005326.1-201ENST00000429197 123 ntBASIC2.52□□□□□ -2.01
ATF4P18848 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
ATF4P18848 RPL23AP6-201ENST00000446637 472 ntBASIC2.52□□□□□ -2.01
ATF4P18848 RNU7-121P-201ENST00000516604 62 ntBASIC2.52□□□□□ -2.01
ATF4P18848 RNU6-255P-201ENST00000516957 105 ntBASIC2.52□□□□□ -2.01
ATF4P18848 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.52□□□□□ -2.01
ATF4P18848 DNAJC19P2-201ENST00000593340 302 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms