Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MTND1P19-201ENST00000511780 315 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 AP000942.4-201ENST00000604811 241 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 AL513423.1-201ENST00000621695 132 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PF4V1P10720 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 SNORD27-201ENST00000363981 72 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 Y_RNA.477-201ENST00000384352 108 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 Y_RNA.489-201ENST00000384410 101 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 MT-TG-201ENST00000387429 68 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 SNORA12.1-201ENST00000390873 148 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 SNORD58.1-201ENST00000391313 66 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 MIR1267-201ENST00000408723 78 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.09□□□□□ -2.07
PF4V1P10720 MIR5688-201ENST00000580619 83 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 AL591926.4-201ENST00000616895 298 ntBASIC2.09□□□□□ -2.07
PF4V1P10720 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PF4V1P10720 SNORA20.1-201ENST00000364790 130 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 MIR30A-201ENST00000385092 71 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 PGBD4P5-201ENST00000445958 426 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.08□□□□□ -2.08
PF4V1P10720 Y_RNA.673-201ENST00000516306 88 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 Y_RNA.714-201ENST00000517065 90 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 MIR4762-201ENST00000585261 75 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 JPX_2.1-201ENST00000614161 69 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 MIR6817-201ENST00000615588 66 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
PF4V1P10720 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
PF4V1P10720 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PF4V1P10720 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PF4V1P10720 Y_RNA.188-201ENST00000363952 111 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 U8.5-201ENST00000364528 136 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 Y_RNA.293-201ENST00000364908 93 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 MIR526A2-201ENST00000390198 65 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 RNU6-651P-201ENST00000411040 105 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 RN7SKP192-201ENST00000411291 327 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.07□□□□□ -2.08
PF4V1P10720 Z98949.2-201ENST00000440996 144 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 AL513328.1-201ENST00000446460 224 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 Y_RNA.638-201ENST00000459374 113 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.07□□□□□ -2.08
PF4V1P10720 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 MIR4643-201ENST00000577473 78 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 AL442067.1-201ENST00000613261 223 ntBASIC2.07□□□□□ -2.08
PF4V1P10720 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PF4V1P10720 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PF4V1P10720 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
PF4V1P10720 MIR424-201ENST00000362227 98 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 MIR126-201ENST00000362291 85 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 MIR367-201ENST00000362299 68 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 Y_RNA.60-201ENST00000362831 98 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 SNORD68-201ENST00000363214 84 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 RNU6-969P-201ENST00000383900 105 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 RNU6-424P-201ENST00000384367 105 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 MIR194-1-201ENST00000384892 85 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 Y_RNA.680-201ENST00000516441 93 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 MIR4724-201ENST00000579485 89 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 Y_RNA.802-201ENST00000614892 130 ntBASIC2.06□□□□□ -2.08
PF4V1P10720 RNA5SP68-201ENST00000363885 119 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 Y_RNA.304-201ENST00000365011 112 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 RNU6-203P-201ENST00000384038 104 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 Y_RNA.539-201ENST00000384635 107 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.05□□□□□ -2.08
PF4V1P10720 SNRPGP10-201ENST00000432323 225 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.05□□□□□ -2.08
PF4V1P10720 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.05□□□□□ -2.08
PF4V1P10720 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 RNU4-71P-201ENST00000516258 113 ntBASIC2.05□□□□□ -2.08
PF4V1P10720 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.05□□□□□ -2.08
PF4V1P10720 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.05□□□□□ -2.08
PF4V1P10720 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.05□□□□□ -2.08
PF4V1P10720 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.05□□□□□ -2.08
PF4V1P10720 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PF4V1P10720 Y_RNA.796-201ENST00000364268 102 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 Y_RNA.799-201ENST00000364992 102 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 SNORA8.3-201ENST00000384679 139 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 SNORA80E-201ENST00000384744 137 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 MIR522-201ENST00000385071 87 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 RNA5SP496-201ENST00000391240 109 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 CALM2P4-201ENST00000430810 426 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 RNA5SP148-201ENST00000516527 94 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 RNA5SP168-201ENST00000516642 112 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 RNU6-1271P-201ENST00000517049 105 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 SNORA77B-201ENST00000578179 125 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 MIR3124-201ENST00000582636 67 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 AC006006.1-201ENST00000603082 144 ntBASIC2.04□□□□□ -2.08
PF4V1P10720 Y_RNA.65-201ENST00000362846 100 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 Y_RNA.76-201ENST00000362931 109 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 RNU6-1209P-201ENST00000363655 107 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 Y_RNA.292-201ENST00000364904 97 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 MIR660-201ENST00000385235 97 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 MIR181B1-201ENST00000385240 110 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 RNU6-131P-201ENST00000391144 107 ntBASIC2.03□□□□□ -2.08
PF4V1P10720 AL590004.2-201ENST00000404787 371 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms