Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.1□□□□□ -2.39
ZNF728P0DKX0 AL162413.1-201ENST00000603198 110 ntBASIC0.1□□□□□ -2.39
ZNF728P0DKX0 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
ZNF728P0DKX0 AC124864.2-201ENST00000624736 186 ntBASIC0.1□□□□□ -2.39
ZNF728P0DKX0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.39
ZNF728P0DKX0 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.253-201ENST00000364562 112 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.256-201ENST00000364594 104 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.414-201ENST00000384011 101 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 MIR520H-201ENST00000385126 88 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 DEFB108C-201ENST00000400154 252 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 MIR190B-201ENST00000401119 79 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 MLLT10P1-201ENST00000418346 262 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 MTND1P26-201ENST00000440488 538 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 HMGN2P32-201ENST00000444648 269 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.09□□□□□ -2.4
ZNF728P0DKX0 RNU6-1281P-201ENST00000516223 105 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 RNU6-1337P-201ENST00000516525 95 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC012433.1-201ENST00000588916 398 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC011712.1-201ENST00000588959 234 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC092634.7-201ENST00000621022 103 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC091925.1-201ENST00000623204 462 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 AC090582.1-201ENST00000636321 199 ntBASIC0.09□□□□□ -2.4
ZNF728P0DKX0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.09□□□□□ -2.4
ZNF728P0DKX0 RNU6-879P-201ENST00000364328 108 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.364-201ENST00000365532 101 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 MIR613-201ENST00000385248 95 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 RNU6-908P-201ENST00000410160 94 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.08□□□□□ -2.4
ZNF728P0DKX0 UBE2V1P7-201ENST00000446395 340 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 AL355375.2-201ENST00000574825 175 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 MIR3612-201ENST00000579753 87 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.48-201ENST00000362710 103 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.77-201ENST00000362962 107 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 RNY1P16-201ENST00000363063 111 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 RNU6-1059P-201ENST00000363752 98 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 SNORD50B-201ENST00000364995 70 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 RNU6-396P-201ENST00000365369 105 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 RNU6-1042P-201ENST00000384204 107 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 RNU6-1119P-201ENST00000384349 108 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.557-201ENST00000384680 107 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR520F-201ENST00000384824 87 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
ZNF728P0DKX0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.07□□□□□ -2.4
ZNF728P0DKX0 USP9YP30-201ENST00000430729 455 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.07□□□□□ -2.4
ZNF728P0DKX0 AC010486.3-201ENST00000511602 785 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 SNORA40.9-201ENST00000515895 93 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 SNORA25.10-201ENST00000515926 124 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 AC022616.4-201ENST00000522985 181 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR5701-3-201ENST00000578890 82 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR4514-201ENST00000581410 57 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR548AR-201ENST00000582191 57 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR5701-1-201ENST00000585138 82 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 MIR5701-2-201ENST00000615634 82 ntBASIC0.07□□□□□ -2.4
ZNF728P0DKX0 SNORD44.1-201ENST00000363202 61 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.112-201ENST00000363250 102 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 SNORD115-30-201ENST00000364117 82 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.376-201ENST00000365638 108 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-259P-201ENST00000383999 107 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-483P-201ENST00000384088 108 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-1310P-201ENST00000384153 107 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-842P-201ENST00000384269 107 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 MIR193B-201ENST00000384907 83 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 SNORD28B-201ENST00000390993 75 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-780P-201ENST00000391030 104 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-131P-201ENST00000391144 107 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-332P-201ENST00000391193 108 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 SNORD83.1-201ENST00000411362 77 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 MTND2P9-201ENST00000422293 931 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 MTND4LP16-201ENST00000440828 295 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU7-87P-201ENST00000459343 62 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-329P-201ENST00000459618 107 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 AC019235.1-201ENST00000503847 207 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-977P-201ENST00000516411 103 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 Y_RNA.704-201ENST00000516851 102 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 MIR3942-201ENST00000585264 109 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 NBR2-204ENST00000587322 63 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
ZNF728P0DKX0 RNU6-451P-201ENST00000362921 107 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 RNA5SP62-201ENST00000363457 110 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 MIR518A1-201ENST00000385068 85 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.05□□□□□ -2.4
ZNF728P0DKX0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF728P0DKX0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF728P0DKX0 SNORA25.12-201ENST00000516202 82 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 RNU1-54P-201ENST00000517181 120 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 AC022523.2-201ENST00000561045 150 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 RBM11P1-201ENST00000604951 799 ntBASIC0.05□□□□□ -2.4
ZNF728P0DKX0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 617.8 ms