Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD45.3-201ENST00000363836 72 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 MT-TN-201ENST00000387400 73 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 USMG5P1-201ENST00000425964 177 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 EIF1P2-201ENST00000428233 350 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 HMGN2P32-201ENST00000444648 269 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 MTND3P7-201ENST00000474435 343 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC116353.2-201ENST00000505332 712 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 SNORA25.10-201ENST00000515926 124 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 RNA5SP94-201ENST00000516917 108 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC018448.1-201ENST00000552843 316 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC093424.1-201ENST00000604999 338 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC124303.1-201ENST00000605703 360 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 AC087752.4-201ENST00000605911 462 ntBASIC-0.07□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 RNU6-595P-201ENST00000363944 107 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 RNU6-205P-201ENST00000390858 107 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 AC010486.3-201ENST00000511602 785 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 ZNF519P2-201ENST00000557032 169 ntBASIC-0.08□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 RNA5SP214-201ENST00000363378 118 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 SNORD50B-201ENST00000364995 70 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 RNU2-54P-201ENST00000410299 190 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 AL139396.1-201ENST00000421137 167 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 RNU6-329P-201ENST00000459618 107 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 MIR8087-201ENST00000612745 78 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 MIR3674-201ENST00000636576 68 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 ZNF299P-201ENST00000406845 1804 ntBASIC-0.09□□□□□ -2.42
HLA-DQB2P05538 MIR411-201ENST00000362239 96 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 RNU6-596P-201ENST00000365395 98 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 RNU6-306P-201ENST00000384617 107 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 SNORD100-201ENST00000408573 76 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 RNU7-56P-201ENST00000458744 62 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 RNU7-66P-201ENST00000459469 62 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 AC112693.2-201ENST00000556538 232 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 MIR4273-201ENST00000582824 84 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 MIR4676-201ENST00000583078 72 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 MIR4768-201ENST00000585270 74 ntBASIC-0.1□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 SNORA8.2-201ENST00000384372 139 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 MIR1197-201ENST00000408818 88 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 RNA5SP475-201ENST00000410568 110 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 MTND4LP16-201ENST00000440828 295 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 MIR5190-201ENST00000581537 80 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 AC020891.4-201ENST00000605745 93 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 uc_338.16-201ENST00000621804 95 ntBASIC-0.11□□□□□ -2.43
HLA-DQB2P05538 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 SNORD114-5-201ENST00000362928 70 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 RNU6-131P-201ENST00000391144 107 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 RNA5SP63-201ENST00000391225 112 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 MTCO2P33-201ENST00000402100 465 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 SNRPGP10-201ENST00000432323 225 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 SEPT7P4-201ENST00000437076 306 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 RNU6-625P-201ENST00000459412 107 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 RN7SKP298-201ENST00000515950 94 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 RNA5SP330-201ENST00000517096 96 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 AC022616.4-201ENST00000522985 181 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 Z69908.1-201ENST00000622603 247 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 AC068137.3-201ENST00000639191 341 ntBASIC-0.12□□□□□ -2.43
HLA-DQB2P05538 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 SNORD115-30-201ENST00000364117 82 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 SNORA75.6-201ENST00000391318 127 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AC092447.3-201ENST00000426027 686 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 RNA5SP480-201ENST00000516840 109 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 MTND1P24-201ENST00000552175 861 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AL158211.1-201ENST00000566763 763 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 MIR3672-201ENST00000584290 82 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms