Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 MIR136-201ENST00000385207 82 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 SNORD115-47-201ENST00000391226 86 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 RNA5SP511-201ENST00000410487 115 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.8□□□□□ -2.28
MT-ND3P03897 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.8□□□□□ -2.28
MT-ND3P03897 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.8□□□□□ -2.28
MT-ND3P03897 AC116353.2-201ENST00000505332 712 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AC090517.2-201ENST00000614966 680 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AC007014.2-201ENST00000615581 479 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 AL008636.1-201ENST00000625038 1018 ntBASIC0.8□□□□□ -2.28
MT-ND3P03897 MIR103A2-201ENST00000362154 78 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 MIR1298-201ENST00000408783 112 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 RPL23AP50-201ENST00000434149 455 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.79□□□□□ -2.28
MT-ND3P03897 RNU6-1337P-201ENST00000516525 95 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 SEPT14P17-201ENST00000617978 177 ntBASIC0.79□□□□□ -2.28
MT-ND3P03897 AL442644.1-201ENST00000454390 3105 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 SNORD115-30-201ENST00000364117 82 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 RNU6-342P-201ENST00000384521 104 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 MIR520C-201ENST00000385005 87 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 MIR1277-201ENST00000408536 78 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.78□□□□□ -2.28
MT-ND3P03897 MRPS18CP6-201ENST00000423587 223 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 MIR2053-201ENST00000459295 91 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 SNORA74.3-201ENST00000517108 154 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 RNU2-12P-201ENST00000517216 168 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 AF235103.2-201ENST00000525753 346 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.78□□□□□ -2.28
MT-ND3P03897 AC004467.1-201ENST00000615678 330 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 AL591926.4-201ENST00000616895 298 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
MT-ND3P03897 Y_RNA.86-201ENST00000363020 111 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 AC117470.1-201ENST00000381974 330 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 Y_RNA.516-201ENST00000384541 124 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.77□□□□□ -2.29
MT-ND3P03897 MTND3P10-201ENST00000450967 341 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 RPL7P42-201ENST00000481005 679 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 AC092989.1-201ENST00000481235 277 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 RNU6-408P-201ENST00000515910 100 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 AC002553.4-201ENST00000616896 331 ntBASIC0.77□□□□□ -2.29
MT-ND3P03897 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
MT-ND3P03897 RNA5SP48-201ENST00000363969 126 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 SNORD14.1-201ENST00000365609 90 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 snoU13.25-201ENST00000458945 104 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 RNU7-43P-201ENST00000516554 64 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 Y_RNA.714-201ENST00000517065 90 ntBASIC0.76□□□□□ -2.29
MT-ND3P03897 Y_RNA.339-201ENST00000365325 102 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 MIR625-201ENST00000385047 85 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 MTND4P28-201ENST00000426217 387 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 HMGN2P32-201ENST00000444648 269 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 AC023442.1-201ENST00000531247 422 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 AC133485.1-201ENST00000567176 124 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 AL136317.1-201ENST00000612653 226 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
MT-ND3P03897 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.75□□□□□ -2.29
MT-ND3P03897 RNU6-1084P-201ENST00000362498 107 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 RNU6-1215P-201ENST00000384441 102 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 Y_RNA.540-201ENST00000384638 111 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 SNORA69.1-201ENST00000390904 137 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 AL035398.1-201ENST00000430869 322 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 RNU11-2P-201ENST00000516898 142 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.74□□□□□ -2.29
MT-ND3P03897 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 MIR1244-1-201ENST00000612829 85 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 MIR1244-3-201ENST00000635744 85 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 MIR1244-2-201ENST00000636449 85 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 MIR1244-4-202ENST00000636813 85 ntBASIC0.74□□□□□ -2.29
MT-ND3P03897 Y_RNA.72-201ENST00000362894 103 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 Y_RNA.404-201ENST00000383978 102 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 SNORA75.4-201ENST00000391278 119 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 MTND1P34-201ENST00000438556 671 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 AC067940.1-201ENST00000458411 300 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 COX6CP6-201ENST00000490840 228 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 RNA5SP480-201ENST00000516840 109 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 AC109810.1-201ENST00000534066 224 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.73□□□□□ -2.29
MT-ND3P03897 MIR4764-201ENST00000580680 88 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 AC011712.1-201ENST00000588959 234 ntBASIC0.73□□□□□ -2.29
MT-ND3P03897 Y_RNA.88-201ENST00000363029 99 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 snoU2-30.1-201ENST00000365012 70 ntBASIC0.72□□□□□ -2.29
MT-ND3P03897 Y_RNA.577-201ENST00000384794 101 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms