Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 RNU6-1337P-201ENST00000516525 95 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 RNU6-1213P-201ENST00000517075 94 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
SEMA3DO95025 AC004467.1-201ENST00000615678 330 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 AL591926.4-201ENST00000616895 298 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 AC002553.4-201ENST00000616896 331 ntBASIC0.61□□□□□ -2.31
SEMA3DO95025 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SEMA3DO95025 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
SEMA3DO95025 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SEMA3DO95025 RNU6-961P-201ENST00000363893 105 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 SNORD115-30-201ENST00000364117 82 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 RNU6-99P-201ENST00000364721 107 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 Y_RNA.330-201ENST00000365230 109 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 RNU6-926P-201ENST00000384075 107 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 Y_RNA.482-201ENST00000384377 111 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 SNORD116-4-201ENST00000384733 96 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 MIR516B2-201ENST00000385190 85 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 MIR1298-201ENST00000408783 112 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
SEMA3DO95025 AL162725.1-201ENST00000435405 301 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AC093019.1-201ENST00000443135 252 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.6□□□□□ -2.31
SEMA3DO95025 RPS20P10-201ENST00000451209 253 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 RNU2-12P-201ENST00000517216 168 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AF235103.2-201ENST00000525753 346 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AC093783.1-201ENST00000612976 329 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.6□□□□□ -2.31
SEMA3DO95025 PISRT1.1-201ENST00000616930 107 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 AC027279.3-201ENST00000625055 122 ntBASIC0.6□□□□□ -2.31
SEMA3DO95025 RNA5SP264-201ENST00000363115 107 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 SNORA25.3-201ENST00000363205 127 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 RNU6-1310P-201ENST00000384153 107 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SEMA3DO95025 SNORA75.4-201ENST00000391278 119 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 MIR1277-201ENST00000408536 78 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 MIR548J-201ENST00000408833 112 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 SUMO1P2-201ENST00000452524 304 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 MIR2053-201ENST00000459295 91 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 RPL17P19-201ENST00000489069 552 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 AC011352.1-201ENST00000512300 793 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.59□□□□□ -2.31
SEMA3DO95025 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SEMA3DO95025 AC007014.2-201ENST00000615581 479 ntBASIC0.59□□□□□ -2.31
SEMA3DO95025 CASC19-280ENST00000642102 1351 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 SNORD114-7-201ENST00000362520 77 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 Y_RNA.172-201ENST00000363765 102 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 RNU6-1335P-201ENST00000365426 107 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 Y_RNA.361-201ENST00000365515 120 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 MIR452-201ENST00000385020 85 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AL035398.1-201ENST00000430869 322 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.58□□□□□ -2.32
SEMA3DO95025 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.58□□□□□ -2.32
SEMA3DO95025 RNU7-41P-201ENST00000515917 61 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 SNORA25.10-201ENST00000515926 124 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.58□□□□□ -2.32
SEMA3DO95025 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AC023827.1-201ENST00000569247 97 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 AC022709.1-201ENST00000615967 87 ntBASIC0.58□□□□□ -2.32
SEMA3DO95025 MIR103A2-201ENST00000362154 78 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 Y_RNA.101-201ENST00000363154 102 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 RNU6-1105P-201ENST00000384774 107 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 AL390729.2-201ENST00000416137 156 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 MLLT10P1-201ENST00000418346 262 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.57□□□□□ -2.32
SEMA3DO95025 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.57□□□□□ -2.32
SEMA3DO95025 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 AC005899.2-201ENST00000584353 90 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 AC084782.3-201ENST00000612282 578 ntBASIC0.57□□□□□ -2.32
SEMA3DO95025 RNY1-201ENST00000364228 113 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 U8.5-201ENST00000364528 136 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 RNU6-1297P-201ENST00000384415 104 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AL031003.1-201ENST00000404229 172 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 MIR1185-1-201ENST00000408598 86 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 RNU4-14P-201ENST00000410858 122 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 RPL30P15-201ENST00000457129 321 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AC116353.2-201ENST00000505332 712 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 SNORA70.12-201ENST00000516084 153 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AP003716.2-201ENST00000528260 108 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AC131055.1-201ENST00000584626 316 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AC011712.1-201ENST00000588959 234 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.56□□□□□ -2.32
SEMA3DO95025 AC087588.2-201ENST00000617667 426 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 MIR6515-201ENST00000619843 57 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 AL669831.3-213ENST00000636676 183 ntBASIC0.56□□□□□ -2.32
SEMA3DO95025 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.56□□□□□ -2.32
SEMA3DO95025 Y_RNA.354-201ENST00000365448 111 ntBASIC0.55□□□□□ -2.32
SEMA3DO95025 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
SEMA3DO95025 MIR520C-201ENST00000385005 87 ntBASIC0.55□□□□□ -2.32
SEMA3DO95025 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
SEMA3DO95025 MTND4P28-201ENST00000426217 387 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms