Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC019193.3-201ENST00000609144 554 ntBASIC-0.06□□□□□ -2.42
SDCBPO00560 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 RNU2-54P-201ENST00000410299 190 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 SNORD71-201ENST00000411292 86 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 BTF3P11-201ENST00000426582 477 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 AC010486.3-201ENST00000511602 785 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 MIR4676-201ENST00000583078 72 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 AC124303.1-201ENST00000605703 360 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 AC087752.4-201ENST00000605911 462 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 uc_338.6-201ENST00000613544 171 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 AC091925.1-201ENST00000623204 462 ntBASIC-0.07□□□□□ -2.42
SDCBPO00560 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.07□□□□□ -2.42
SDCBPO00560 RNY1P16-201ENST00000363063 111 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 RNA5SP214-201ENST00000363378 118 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 RNU6-396P-201ENST00000365369 105 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 SNORA8.2-201ENST00000384372 139 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 RNU6-125P-201ENST00000384505 107 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 MIR193B-201ENST00000384907 83 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 U8.22-201ENST00000459141 133 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 RNU4-77P-201ENST00000516692 156 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.08□□□□□ -2.42
SDCBPO00560 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.08□□□□□ -2.42
SDCBPO00560 MIR3672-201ENST00000584290 82 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 AC008608.1-201ENST00000603910 127 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.08□□□□□ -2.42
SDCBPO00560 MIR3674-201ENST00000636576 68 ntBASIC-0.08□□□□□ -2.42
SDCBPO00560 MIR377-201ENST00000362145 69 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 SNORD114-7-201ENST00000362520 77 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 MT-TN-201ENST00000387400 73 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 SNORA75.6-201ENST00000391318 127 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 SNORD100-201ENST00000408573 76 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.09□□□□□ -2.42
SDCBPO00560 AL139396.1-201ENST00000421137 167 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.09□□□□□ -2.42
SDCBPO00560 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.09□□□□□ -2.42
SDCBPO00560 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.09□□□□□ -2.42
SDCBPO00560 AC090617.3-201ENST00000573670 475 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 AC011712.1-201ENST00000588959 234 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 AC104408.1-201ENST00000605241 170 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 ZNF299P-201ENST00000406845 1804 ntBASIC-0.09□□□□□ -2.42
SDCBPO00560 RNU6-874P-201ENST00000362390 105 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 SNORD115-30-201ENST00000364117 82 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
SDCBPO00560 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 USMG5P1-201ENST00000425964 177 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.1□□□□□ -2.43
SDCBPO00560 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.1□□□□□ -2.43
SDCBPO00560 SUMO1P2-201ENST00000452524 304 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 RNU6-625P-201ENST00000459412 107 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 HMGN1P10-201ENST00000474557 553 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 RNU6-256P-201ENST00000516747 97 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.1□□□□□ -2.43
SDCBPO00560 MTND1P24-201ENST00000552175 861 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 AC112693.2-201ENST00000556538 232 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 AC010525.2-201ENST00000590920 195 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 AC024933.1-201ENST00000608472 348 ntBASIC-0.1□□□□□ -2.43
SDCBPO00560 SNORD114-5-201ENST00000362928 70 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 SNORA36.1-201ENST00000363424 132 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SDCBPO00560 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.11□□□□□ -2.43
SDCBPO00560 AC090844.1-201ENST00000422019 156 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.11□□□□□ -2.43
SDCBPO00560 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 AC073114.1-201ENST00000612027 490 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 MTND1P7-201ENST00000632801 297 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 AC068137.3-201ENST00000639191 341 ntBASIC-0.11□□□□□ -2.43
SDCBPO00560 RNU6-842P-201ENST00000384269 107 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 RNU6-318P-201ENST00000384283 103 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 RNU6-131P-201ENST00000391144 107 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 RNA5SP475-201ENST00000410568 110 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 AC092447.3-201ENST00000426027 686 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 SEPT7P4-201ENST00000437076 306 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 HMGN2P32-201ENST00000444648 269 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.12□□□□□ -2.43
SDCBPO00560 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.12□□□□□ -2.43
SDCBPO00560 SNORA40.9-201ENST00000515895 93 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 RNU2-12P-201ENST00000517216 168 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 AC055872.1-201ENST00000570978 278 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 AC090897.1-201ENST00000580909 226 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 MIR4273-201ENST00000582824 84 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 AC098679.4-201ENST00000624241 654 ntBASIC-0.12□□□□□ -2.43
SDCBPO00560 MIR330-201ENST00000362196 94 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms