Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU1-141P-201ENST00000364623 158 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
COL6A5A8TX70 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.11□□□□□ -2.59
COL6A5A8TX70 FGF7P6-202ENST00000451282 293 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 AL157687.1-201ENST00000554853 619 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 RNU4-15P-201ENST00000362613 141 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 SNORA2.2-201ENST00000365473 135 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AC010468.3-201ENST00000508225 458 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 MIR4676-201ENST00000583078 72 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 RNU6-400P-201ENST00000391173 106 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 SNORD110-201ENST00000408189 75 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AL139824.2-201ENST00000458731 1095 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AC011352.1-201ENST00000512300 793 ntBASIC-1.12□□□□□ -2.59
COL6A5A8TX70 AL589826.1-201ENST00000340697 249 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 SNORA24-201ENST00000384096 131 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC015724.1-201ENST00000478577 156 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC023158.1-201ENST00000561632 1025 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.13□□□□□ -2.59
COL6A5A8TX70 MIR4778-201ENST00000577635 80 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AL117336.2-201ENST00000602435 335 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC093783.1-201ENST00000612976 329 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 RNU6-690P-201ENST00000365242 106 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.13□□□□□ -2.59
COL6A5A8TX70 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 AC078795.2-201ENST00000602835 1252 ntBASIC-1.13□□□□□ -2.59
COL6A5A8TX70 RNU6-580P-201ENST00000365159 107 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 RNU6-622P-201ENST00000384272 103 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 MIR363-201ENST00000384840 75 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 MIR520C-201ENST00000385005 87 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 MIR125B2-201ENST00000385128 89 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 RNU6-817P-201ENST00000391083 104 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC018880.2-201ENST00000414265 201 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 BX119904.4-201ENST00000424402 301 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC093519.1-201ENST00000566109 298 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC020891.4-201ENST00000605745 93 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 SNORA63.5-201ENST00000363548 123 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 DPRXP1-201ENST00000426312 460 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC098614.3-201ENST00000438957 440 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 RNU7-41P-201ENST00000515917 61 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AC069431.2-201ENST00000604149 1099 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 AL512506.1-201ENST00000613918 449 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 U6.114-201ENST00000636407 96 ntBASIC-1.14□□□□□ -2.59
COL6A5A8TX70 RNU6-653P-201ENST00000363074 106 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 RNU6-824P-201ENST00000363724 104 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 SNORA49-201ENST00000386157 136 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AC074085.1-201ENST00000413598 418 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AL049861.1-201ENST00000603130 150 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AC022306.2-201ENST00000617563 647 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 SNORD31B-201ENST00000364977 69 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 MTCO3P38-201ENST00000468910 766 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 RNU7-12P-201ENST00000516030 62 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 RNU6-397P-201ENST00000516226 104 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AP001372.4-201ENST00000524889 472 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AL161798.1-201ENST00000604630 131 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 AL136221.1-201ENST00000621449 509 ntBASIC-1.15□□□□□ -2.59
COL6A5A8TX70 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 MTCO3P15-201ENST00000526563 574 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.16□□□□□ -2.59
COL6A5A8TX70 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.16□□□□□ -2.59
COL6A5A8TX70 AC005776.1-201ENST00000603164 290 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 DPPA3P3-201ENST00000603842 430 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 MIR4251-201ENST00000635819 61 ntBASIC-1.16□□□□□ -2.59
COL6A5A8TX70 RNU6-207P-201ENST00000384137 107 ntBASIC-1.16□□□□□ -2.6
COL6A5A8TX70 RNU6-665P-201ENST00000384639 107 ntBASIC-1.16□□□□□ -2.6
COL6A5A8TX70 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.16□□□□□ -2.6
COL6A5A8TX70 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.16□□□□□ -2.6
COL6A5A8TX70 SNORA25.13-201ENST00000516395 103 ntBASIC-1.16□□□□□ -2.6
COL6A5A8TX70 AC022217.4-201ENST00000604389 163 ntBASIC-1.16□□□□□ -2.6
COL6A5A8TX70 MIR1185-2-201ENST00000408687 86 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL6A5A8TX70 RNU7-59P-201ENST00000459101 61 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.17□□□□□ -2.6
COL6A5A8TX70 MIR548W-201ENST00000581970 74 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AL606834.3-201ENST00000602615 496 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 SNORA12.2-201ENST00000391040 156 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 SNORA26.5-201ENST00000391215 123 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 AL138752.1-201ENST00000452964 351 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 RNU7-185P-201ENST00000459215 60 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 RNU6-175P-201ENST00000516896 107 ntBASIC-1.17□□□□□ -2.6
COL6A5A8TX70 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms