Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIR1246-201ENST00000636535 73 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 AL445523.1-201ENST00000451184 1362 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 SNORD38C-201ENST00000384381 69 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 AL031779.1-201ENST00000415663 330 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 RNU6-150P-201ENST00000516237 95 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 SNORD38.3-201ENST00000516599 73 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 AP002782.1-201ENST00000623107 614 ntBASIC-1.47□□□□□ -2.64
RGPD3A6NKT7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 RNY4P6-201ENST00000363667 96 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 SNORA1-201ENST00000384107 130 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 U8.17-201ENST00000391292 132 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 RNU6-274P-201ENST00000459566 107 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 RNA5SP20-201ENST00000515976 84 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 MIR4791-201ENST00000607666 84 ntBASIC-1.47□□□□□ -2.65
RGPD3A6NKT7 RNU6-336P-201ENST00000364891 107 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 MTCO3P19-201ENST00000415864 321 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 GMFBP1-201ENST00000467831 427 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 MIR4491-201ENST00000581087 68 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 AL133255.1-201ENST00000606374 441 ntBASIC-1.48□□□□□ -2.65
RGPD3A6NKT7 RNU6-511P-201ENST00000363496 107 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 MIR320B2-201ENST00000408479 138 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 MTND1P11-201ENST00000456661 876 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 RNU2-11P-201ENST00000459191 187 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 RNA5SP54-201ENST00000516951 92 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC140658.3-201ENST00000567603 271 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AL356055.1-201ENST00000602528 446 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 uc_338.19-201ENST00000616808 99 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC137590.2-201ENST00000619709 240 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC013437.2-201ENST00000639587 677 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 MTND5P17-201ENST00000418405 1603 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 RNY4P27-201ENST00000363341 96 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC074085.1-201ENST00000413598 418 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 SSR1P2-201ENST00000415208 787 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AL031274.1-201ENST00000450334 232 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC011352.1-201ENST00000512300 793 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 AL121757.2-201ENST00000611223 313 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 MIR6851-201ENST00000617060 67 ntBASIC-1.49□□□□□ -2.65
RGPD3A6NKT7 RNU6-777P-201ENST00000364265 104 ntBASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 SNORD64-201ENST00000386683 67 ntBASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 MT-TF-201ENST00000387314 71 ntBASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 AL138752.1-201ENST00000452964 351 ntBASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.5□□□□□ -2.65
RGPD3A6NKT7 AC010332.2-201ENST00000613083 1904 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 MIR181B2-201ENST00000385004 89 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 MTATP6P17-201ENST00000431030 672 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 MTATP6P26-201ENST00000445926 662 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 AP000542.1-201ENST00000448473 371 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 AL500527.2-201ENST00000454105 95 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 AC010587.1-201ENST00000505809 469 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 AC068137.4-201ENST00000638485 296 ntBASIC-1.51□□□□□ -2.65
RGPD3A6NKT7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 SNORD50B-201ENST00000364995 70 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNU6-245P-201ENST00000384020 107 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AL359672.1-201ENST00000442302 409 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNA5SP33-201ENST00000516687 98 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC026421.1-201ENST00000519101 163 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 MTND4P33-201ENST00000556706 766 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNU6-86P-201ENST00000606534 107 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 SNORA43.4-201ENST00000629559 138 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNU6-324P-201ENST00000363957 106 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 RNU6-926P-201ENST00000384075 107 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 SNORD56B-201ENST00000384713 71 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 MIR9-2-201ENST00000384838 87 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 MTND4P18-201ENST00000447010 465 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AP000533.3-201ENST00000447704 118 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC010655.3-201ENST00000478818 450 ntBASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.52□□□□□ -2.65
RGPD3A6NKT7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms