Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC093019.1-201ENST00000443135 252 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 MIR4781-201ENST00000585250 76 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 PRELID3BP2-201ENST00000605362 201 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AL391903.3-201ENST00000612158 163 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC011476.5-201ENST00000615594 130 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC098679.4-201ENST00000624241 654 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC027279.3-201ENST00000625055 122 ntBASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TRAV39A0A0B4J263 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 SNORD114-7-201ENST00000362520 77 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 SNORA25.9-201ENST00000365087 128 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-310P-201ENST00000384655 107 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.577-201ENST00000384794 101 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-876P-201ENST00000391295 104 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.605-201ENST00000410577 105 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-155P-201ENST00000516347 100 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.676-201ENST00000516393 96 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-1084P-201ENST00000362498 107 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 Y_RNA.361-201ENST00000365515 120 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-890P-201ENST00000384121 107 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 RNU2-54P-201ENST00000410299 190 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 FCF1P4-201ENST00000448326 183 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 SNORA25.10-201ENST00000515926 124 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 RNU6-113P-201ENST00000516653 101 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 AC005176.2-201ENST00000596933 147 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 TPTEP1-208ENST00000636884 213 ntBASIC0.66□□□□□ -2.3
TRAV39A0A0B4J263 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.4-201ENST00000362333 112 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-626P-201ENST00000363354 107 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-1188P-201ENST00000363795 107 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-20P-201ENST00000384106 107 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 SNORA75.6-201ENST00000391318 127 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 PDCL2P1-201ENST00000419302 352 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 AC144568.1-201ENST00000520139 137 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 MIR5690-201ENST00000583739 73 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 AC240442.1-201ENST00000616055 283 ntBASIC0.65□□□□□ -2.31
TRAV39A0A0B4J263 MIR103A2-201ENST00000362154 78 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNA5SP264-201ENST00000363115 107 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.279-201ENST00000364763 95 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.314-201ENST00000365114 102 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 MRPS18CP6-201ENST00000423587 223 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 PRDX4P1-201ENST00000507189 574 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNU7-41P-201ENST00000515917 61 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-966P-201ENST00000516479 104 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNA5SP102-201ENST00000516865 106 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 RNU7-4P-201ENST00000516961 62 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 MIR6504-201ENST00000613520 61 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 AC139792.2-201ENST00000624218 587 ntBASIC0.64□□□□□ -2.31
TRAV39A0A0B4J263 U8.5-201ENST00000364528 136 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.446-201ENST00000384178 104 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MIR136-201ENST00000385207 82 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MIR628-201ENST00000385229 95 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 SNORD78.2-201ENST00000391076 69 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-192P-201ENST00000391253 100 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 AC096644.2-201ENST00000429278 159 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 CHEK2P4-201ENST00000450340 246 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MTCO3P10-201ENST00000455912 772 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-470P-201ENST00000515954 104 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.691-201ENST00000516611 103 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 SNORD45.4-201ENST00000516629 73 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 SNORA74.3-201ENST00000517108 154 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MTND4LP26-201ENST00000518144 282 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
TRAV39A0A0B4J263 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.191-201ENST00000363972 113 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 351.6 ms