Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AC120024.3-201ENST00000603167 156 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 AC015540.1-201ENST00000615828 501 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.66□□□□□ -2.3
NUP50Q9UKX7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.66□□□□□ -2.3
NUP50Q9UKX7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
NUP50Q9UKX7 RNA5SP118-201ENST00000410385 109 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.65□□□□□ -2.31
NUP50Q9UKX7 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 MTND5P5-201ENST00000503764 376 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 RNU4-49P-201ENST00000516080 140 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 SNORA70.12-201ENST00000516084 153 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 AC022868.1-201ENST00000517767 391 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.65□□□□□ -2.31
NUP50Q9UKX7 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 MIR4790-201ENST00000577799 79 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 AC018462.2-201ENST00000605375 395 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.65□□□□□ -2.31
NUP50Q9UKX7 MIR3674-201ENST00000636576 68 ntBASIC0.65□□□□□ -2.31
NUP50Q9UKX7 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 RNU4-12P-201ENST00000365233 139 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 RNA5SP475-201ENST00000410568 110 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 RNU6-625P-201ENST00000459412 107 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 CYCTP-201ENST00000504253 315 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.64□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.670-201ENST00000516255 105 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
NUP50Q9UKX7 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
NUP50Q9UKX7 RNY1P16-201ENST00000363063 111 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNA5SP264-201ENST00000363115 107 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 SNORD68-201ENST00000363214 84 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.295-201ENST00000364918 102 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNU6-318P-201ENST00000384283 103 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNU6-700P-201ENST00000391043 107 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AL139396.1-201ENST00000421137 167 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AC114811.1-201ENST00000507207 168 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
NUP50Q9UKX7 AC027279.3-201ENST00000625055 122 ntBASIC0.63□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 SNORD114-26-201ENST00000363543 72 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.243-201ENST00000364481 109 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.358-201ENST00000365491 99 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 RNU6-1105P-201ENST00000384774 107 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.594-201ENST00000410373 140 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 RNA5SP511-201ENST00000410487 115 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
NUP50Q9UKX7 AL353997.1-201ENST00000432936 108 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 FABP5P4-201ENST00000437203 171 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 UBE2V1P7-201ENST00000446395 340 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 SNORA40.9-201ENST00000515895 93 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.682-201ENST00000516457 100 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 RNU6-1016P-201ENST00000516689 94 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.62□□□□□ -2.31
NUP50Q9UKX7 AC023442.1-201ENST00000531247 422 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.62□□□□□ -2.31
NUP50Q9UKX7 EIF1P4-201ENST00000572664 335 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 AL442644.1-201ENST00000454390 3105 ntBASIC0.62□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.2-201ENST00000362330 96 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.361-201ENST00000365515 120 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AC074085.1-201ENST00000413598 418 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AL354751.2-201ENST00000415471 210 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 MTCYBP10-201ENST00000424905 650 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 RPS20P10-201ENST00000451209 253 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 SUMO1P2-201ENST00000452524 304 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 RNU6-1132P-201ENST00000459214 107 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 RNA5SP436-201ENST00000516020 115 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AC012557.2-201ENST00000605919 418 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 AC093913.1-201ENST00000614178 329 ntBASIC0.61□□□□□ -2.31
NUP50Q9UKX7 MIR103A2-201ENST00000362154 78 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 SNORD114-7-201ENST00000362520 77 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 SNORA25.3-201ENST00000363205 127 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.436-201ENST00000384097 102 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.573-201ENST00000384763 105 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 MIR452-201ENST00000385020 85 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 MIR1298-201ENST00000408783 112 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 RNU6-1050P-201ENST00000410388 107 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.621-201ENST00000411065 96 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms