Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.18□□□□□ -2.38
VAPAQ9P0L0 MIR4762-201ENST00000585261 75 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AC104695.3-201ENST00000604052 296 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AC005828.6-201ENST00000606610 232 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AF250324.2-201ENST00000608299 610 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 MIR4251-201ENST00000635819 61 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 RNU6-1084P-201ENST00000362498 107 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.135-201ENST00000363439 95 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.530-201ENST00000384587 101 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 MIR573-201ENST00000384964 99 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 MTCO3P40-201ENST00000392516 676 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 MIR1287-201ENST00000408492 90 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.17□□□□□ -2.38
VAPAQ9P0L0 EIF1P2-201ENST00000428233 350 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 MTND1P4-201ENST00000435196 415 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.693-201ENST00000516641 110 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 AC006362.1-201ENST00000567392 174 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 AL355073.2-201ENST00000612106 557 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 AL391262.2-201ENST00000622466 494 ntBASIC0.17□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.48-201ENST00000362710 103 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNU6-1145P-201ENST00000384246 107 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.490-201ENST00000384413 102 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNY1P14-201ENST00000384426 108 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNU6-625P-201ENST00000459412 107 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RNU7-66P-201ENST00000459469 62 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 AC010424.1-201ENST00000506336 297 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.16□□□□□ -2.38
VAPAQ9P0L0 SNORD45.4-201ENST00000516629 73 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 MIR4760-201ENST00000585040 80 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 DISC2.1-201ENST00000612827 205 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 RMST_2.1-201ENST00000617263 136 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 AC015726.2-201ENST00000620112 122 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 MIR3674-201ENST00000636576 68 ntBASIC0.16□□□□□ -2.38
VAPAQ9P0L0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
VAPAQ9P0L0 MIR410-201ENST00000362222 80 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 SNORD116-11-201ENST00000383882 92 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.15□□□□□ -2.39
VAPAQ9P0L0 SUMO1P2-201ENST00000452524 304 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
VAPAQ9P0L0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.15□□□□□ -2.39
VAPAQ9P0L0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.15□□□□□ -2.39
VAPAQ9P0L0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.14□□□□□ -2.39
VAPAQ9P0L0 MIR103A1-201ENST00000362165 78 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU6-879P-201ENST00000364328 108 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU6-596P-201ENST00000365395 98 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 MIR520H-201ENST00000385126 88 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 DEFB108C-201ENST00000400154 252 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU6-613P-201ENST00000410412 108 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU7-87P-201ENST00000459343 62 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 AC105313.1-201ENST00000509121 353 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU6-1281P-201ENST00000516223 105 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 AC022709.1-201ENST00000615967 87 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 MTND5P26-201ENST00000426018 1752 ntBASIC0.14□□□□□ -2.39
VAPAQ9P0L0 RNU6-1059P-201ENST00000363752 98 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.243-201ENST00000364481 109 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 RNU6-42P-201ENST00000384165 107 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 MIR522-201ENST00000385071 87 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 MTND1P26-201ENST00000440488 538 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 RNU6-1337P-201ENST00000516525 95 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 SNORA4-201ENST00000584302 138 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AL162413.1-201ENST00000603198 110 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AC092634.7-201ENST00000621022 103 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AL359880.1-201ENST00000621879 266 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AC124864.2-201ENST00000624736 186 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AC090582.1-201ENST00000636321 199 ntBASIC0.13□□□□□ -2.39
VAPAQ9P0L0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.13□□□□□ -2.39
VAPAQ9P0L0 AL589743.1-201ENST00000551932 2712 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 SNORD114-7-201ENST00000362520 77 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.253-201ENST00000364562 112 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.414-201ENST00000384011 101 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 MIR520F-201ENST00000384824 87 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 MIR190B-201ENST00000401119 79 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.12□□□□□ -2.39
VAPAQ9P0L0 MIR2115-201ENST00000516657 100 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.704-201ENST00000516851 102 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 RNU6-273P-201ENST00000516937 96 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.717-201ENST00000517106 92 ntBASIC0.12□□□□□ -2.39
VAPAQ9P0L0 RNU6-369P-201ENST00000362515 102 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 RNU6-483P-201ENST00000384088 108 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 RNU6-1042P-201ENST00000384204 107 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 SNORD83.1-201ENST00000411362 77 ntBASIC0.11□□□□□ -2.39
VAPAQ9P0L0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms