Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.68□□□□□ -2.3
HPF1Q9NWY4 ELOCP24-201ENST00000456370 334 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 RNU6-63P-201ENST00000516690 95 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AC131055.1-201ENST00000584626 316 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AF250324.2-201ENST00000608299 610 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 AC093913.1-201ENST00000614178 329 ntBASIC0.68□□□□□ -2.3
HPF1Q9NWY4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.68□□□□□ -2.3
HPF1Q9NWY4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
HPF1Q9NWY4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.9-201ENST00000362354 101 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.157-201ENST00000363638 102 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 MIR15B-201ENST00000385045 98 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 AC067940.1-201ENST00000458411 300 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 U7.7-201ENST00000459276 60 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.67□□□□□ -2.3
HPF1Q9NWY4 AC105029.1-201ENST00000520250 669 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
HPF1Q9NWY4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HPF1Q9NWY4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
HPF1Q9NWY4 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 RNU6-454P-201ENST00000364292 107 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 RNU6-1310P-201ENST00000384153 107 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 MIR520C-201ENST00000385005 87 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 SNORD89-201ENST00000390981 114 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 MIR1298-201ENST00000408783 112 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AL354751.2-201ENST00000415471 210 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AL162725.1-201ENST00000435405 301 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.66□□□□□ -2.3
HPF1Q9NWY4 SNORA40.9-201ENST00000515895 93 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AC024909.2-201ENST00000553035 286 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AC005014.2-201ENST00000607795 599 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 7SK.10-201ENST00000621414 298 ntBASIC0.66□□□□□ -2.3
HPF1Q9NWY4 U8.5-201ENST00000364528 136 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 SNORD116-2-201ENST00000384274 95 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.517-201ENST00000384551 106 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 SNORD116-6-201ENST00000384711 96 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 SNORA74.3-201ENST00000517108 154 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 MIR4714-201ENST00000580728 77 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 AC018462.2-201ENST00000605375 395 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 AC103591.3-201ENST00000608684 209 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 AL591926.4-201ENST00000616895 298 ntBASIC0.65□□□□□ -2.31
HPF1Q9NWY4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HPF1Q9NWY4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HPF1Q9NWY4 RNY1P16-201ENST00000363063 111 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 SNORA25.3-201ENST00000363205 127 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 MIR516B2-201ENST00000385190 85 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 MIR136-201ENST00000385207 82 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 AC074085.1-201ENST00000413598 418 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 RPL23AP50-201ENST00000434149 455 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 AC098869.1-201ENST00000481627 292 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 RNU6-1016P-201ENST00000516689 94 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 AL136317.1-201ENST00000612653 226 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 MIR6515-201ENST00000619843 57 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 AC068700.1-201ENST00000565862 3754 ntBASIC0.64□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.2-201ENST00000362330 96 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 RNY4P14-201ENST00000363656 96 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.573-201ENST00000384763 105 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 RNA5SP511-201ENST00000410487 115 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 MTND4LP26-201ENST00000518144 282 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 AP003716.2-201ENST00000528260 108 ntBASIC0.63□□□□□ -2.31
HPF1Q9NWY4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
HPF1Q9NWY4 RNU6-874P-201ENST00000362390 105 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.194-201ENST00000363985 102 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 MIR1185-1-201ENST00000408598 86 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 RNU6-994P-201ENST00000410507 111 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 RNU6-1148P-201ENST00000410992 104 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 AL353997.1-201ENST00000432936 108 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 RNU7-41P-201ENST00000515917 61 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 MIR4762-201ENST00000585261 75 ntBASIC0.62□□□□□ -2.31
HPF1Q9NWY4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.41-201ENST00000362646 102 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.89-201ENST00000363031 102 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 RNU6-593P-201ENST00000364716 112 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 Y_RNA.358-201ENST00000365491 99 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.61□□□□□ -2.31
HPF1Q9NWY4 AC092423.1-201ENST00000430165 186 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 U8.22-201ENST00000459141 133 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 MTND5P5-201ENST00000503764 376 ntBASIC0.61□□□□□ -2.31
HPF1Q9NWY4 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms