Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MTND3P21-201ENST00000433774 331 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 RNA5SP102-201ENST00000516865 106 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 MTND2P38-201ENST00000522536 667 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AC005014.2-201ENST00000607795 599 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 AF250324.2-201ENST00000608299 610 ntBASIC0.46□□□□□ -2.34
CLN6Q9NWW5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.46□□□□□ -2.34
CLN6Q9NWW5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.243-201ENST00000364481 109 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 RNU6-1310P-201ENST00000384153 107 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 AC105029.1-201ENST00000520250 669 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 CYP3A137P-201ENST00000562436 69 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 RNU6-94P-201ENST00000607728 107 ntBASIC0.45□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.2-201ENST00000362330 96 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 RNU6-874P-201ENST00000362390 105 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 RNY1P16-201ENST00000363063 111 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.44□□□□□ -2.34
CLN6Q9NWW5 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 AL353997.1-201ENST00000432936 108 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 U8.22-201ENST00000459141 133 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 RN7SKP164-201ENST00000516138 266 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 SNORA18.7-201ENST00000516910 131 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 MIR4764-201ENST00000580680 88 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 MIR4762-201ENST00000585261 75 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 AC018462.2-201ENST00000605375 395 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.157-201ENST00000363638 102 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.358-201ENST00000365491 99 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.517-201ENST00000384551 106 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 MIR181A1-201ENST00000385026 110 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 RNU6-1148P-201ENST00000410992 104 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 AC074085.1-201ENST00000413598 418 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 RNU6-1337P-201ENST00000516525 95 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 RNU7-43P-201ENST00000516554 64 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 AC103591.3-201ENST00000608684 209 ntBASIC0.43□□□□□ -2.34
CLN6Q9NWW5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.43□□□□□ -2.34
CLN6Q9NWW5 MIR337-201ENST00000362281 93 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.9-201ENST00000362354 101 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNU6-318P-201ENST00000384283 103 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.473-201ENST00000384333 102 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNA5SP118-201ENST00000410385 109 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 MLLT10P1-201ENST00000418346 262 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNU6-1053P-201ENST00000515930 101 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNU6-1016P-201ENST00000516689 94 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 AC093027.1-201ENST00000546698 429 ntBASIC0.42□□□□□ -2.34
CLN6Q9NWW5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.42□□□□□ -2.34
CLN6Q9NWW5 RNU6-1084P-201ENST00000362498 107 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.41-201ENST00000362646 102 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 RNY4P14-201ENST00000363656 96 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AC117470.1-201ENST00000381974 330 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD116-2-201ENST00000384274 95 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD116-6-201ENST00000384711 96 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD111-201ENST00000408139 94 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD12B-201ENST00000410433 91 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AL390729.2-201ENST00000416137 156 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.41□□□□□ -2.34
CLN6Q9NWW5 MTND5P5-201ENST00000503764 376 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AC026782.1-201ENST00000512952 449 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 RNU6-237P-201ENST00000515985 71 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 Y_RNA.682-201ENST00000516457 100 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AF235103.2-201ENST00000525753 346 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 AC036111.3-201ENST00000526389 112 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 MIR4298-201ENST00000584380 73 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.41□□□□□ -2.34
CLN6Q9NWW5 SNORD115-30-201ENST00000364117 82 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.301-201ENST00000364990 103 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.338-201ENST00000365320 114 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.361-201ENST00000365515 120 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 SNORA36.2-201ENST00000384004 127 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.573-201ENST00000384763 105 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CLN6Q9NWW5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.594-201ENST00000410373 140 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 HMGN2P32-201ENST00000444648 269 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 RNU4-49P-201ENST00000516080 140 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 RNU11-2P-201ENST00000516898 142 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 AC024909.2-201ENST00000553035 286 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 AC015540.1-201ENST00000615828 501 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 AL359757.2-201ENST00000624309 274 ntBASIC0.4□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.89-201ENST00000363031 102 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.194-201ENST00000363985 102 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 Y_RNA.253-201ENST00000364562 112 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 SNORD113.3-201ENST00000364630 78 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 snoU2-30.1-201ENST00000365012 70 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CLN6Q9NWW5 MIR522-201ENST00000385071 87 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 845.8 ms