Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 Y_RNA.621-201ENST00000411065 96 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 AL513477.1-202ENST00000417061 214 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 AL513328.1-201ENST00000446460 224 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 RNU7-107P-201ENST00000459121 61 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 AC011406.1-201ENST00000512440 370 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 RNU6-667P-201ENST00000517186 102 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 AC073413.2-201ENST00000604332 360 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 JPX_2.1-201ENST00000614161 69 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 RNU1-96P-201ENST00000364163 162 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 UBL5P3-201ENST00000475112 231 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 RNU1-41P-201ENST00000516161 162 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 RNU1-48P-201ENST00000516400 162 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 Pinc.1-201ENST00000616452 154 ntBASIC3.17□□□□□ -1.9
TMEM39AQ9NV64 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RNU6-859P-201ENST00000362728 107 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 snoU2-30.2-201ENST00000362805 70 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RNU6-1325P-201ENST00000364905 105 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.294-201ENST00000364916 102 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RNU6-44P-201ENST00000384045 107 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 MIR562-201ENST00000384894 95 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 MIR520G-201ENST00000385064 90 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 AL035461.1-201ENST00000421490 332 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RPS15AP28-201ENST00000435088 386 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 OR9P1P-201ENST00000496431 281 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RN7SKP179-201ENST00000516126 217 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RNU6-919P-201ENST00000516731 104 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 RNU7-149P-201ENST00000516739 59 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.757-201ENST00000578934 114 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 MIR7843-201ENST00000622274 79 ntBASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM39AQ9NV64 U8.1-201ENST00000362843 134 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.525-201ENST00000384570 113 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 SNORA26-201ENST00000391286 122 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 AC018868.1-201ENST00000491307 315 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 RNU6-1041P-201ENST00000516254 102 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 RNU7-99P-201ENST00000516271 62 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 AC090049.2-201ENST00000550377 109 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 AC007229.1-201ENST00000590455 412 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 AC097639.2-201ENST00000603159 172 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.91
TMEM39AQ9NV64 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 MIR148B-201ENST00000362252 99 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 RNU6-834P-201ENST00000362367 110 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 RNU6-235P-201ENST00000362644 107 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC003685.2-201ENST00000422795 395 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC233266.1-201ENST00000454518 96 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP76-201ENST00000516277 87 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.692-201ENST00000516627 105 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC131055.1-201ENST00000584626 316 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC242852.1-201ENST00000612151 96 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC244015.1-201ENST00000622301 99 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TMEM39AQ9NV64 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.120-201ENST00000363304 110 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP68-201ENST00000363885 119 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 RNU6-1138P-201ENST00000365359 106 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 RNU6-1056P-201ENST00000383996 107 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.563-201ENST00000384707 108 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 MIR9-1-201ENST00000385198 89 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 RNU6-126P-201ENST00000516685 103 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 MIR4662B-201ENST00000579498 81 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 MIR6817-201ENST00000615588 66 ntBASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TMEM39AQ9NV64 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNU6-461P-201ENST00000364195 107 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNU1-112P-201ENST00000364401 164 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP125-201ENST00000364843 120 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 SNORA25B-201ENST00000365507 128 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 Y_RNA.486-201ENST00000384398 107 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNU11-5P-201ENST00000391216 129 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP467-201ENST00000391274 118 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNU6-1291P-201ENST00000516591 104 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 RNU7-128P-201ENST00000517247 62 ntBASIC3.12□□□□□ -1.91
TMEM39AQ9NV64 NDUFA5P6-201ENST00000542110 379 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms