Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.331-201ENST00000365267 102 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.445-201ENST00000384168 102 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 MIR1185-2-201ENST00000408687 86 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 RNU6-101P-201ENST00000410323 104 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC099677.2-201ENST00000436385 175 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 UQCRBP2-201ENST00000447827 297 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 RNU7-34P-201ENST00000459394 64 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 OR2A41P-201ENST00000473586 105 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 RNU6-948P-201ENST00000516374 107 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC027419.1-201ENST00000522976 328 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC091178.2-201ENST00000584401 117 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC008873.1-201ENST00000625051 138 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AL606534.2-204ENST00000635008 178 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.39-201ENST00000362620 98 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 RNU6-1040P-201ENST00000383974 107 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 MIR520A-201ENST00000384862 85 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 MIR548B-201ENST00000385247 97 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 RNU2-54P-201ENST00000410299 190 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC016909.1-201ENST00000415916 166 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC092423.1-201ENST00000430165 186 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC005908.1-201ENST00000468701 347 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC022868.1-201ENST00000517767 391 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 CYCSP23-201ENST00000519781 313 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC144568.1-201ENST00000520139 137 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AC093027.1-201ENST00000546698 429 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AL160236.1-201ENST00000556317 195 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 MIR3937-201ENST00000580135 106 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 MIR4795-201ENST00000584182 89 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AL359075.3-201ENST00000613288 217 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 AL160413.1-201ENST00000622780 310 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 U6.92-201ENST00000636464 89 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.88□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.463-201ENST00000384271 102 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RNA5SP323-201ENST00000391094 133 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AL117342.1-201ENST00000404861 406 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RPL30P13-201ENST00000418873 348 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC010154.1-201ENST00000425857 269 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 FGF7P4-201ENST00000509595 295 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RNU1-142P-201ENST00000516682 145 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC022217.4-201ENST00000604389 163 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.804-201ENST00000615262 101 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC084781.2-201ENST00000615568 161 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AL138825.1-201ENST00000618587 192 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AL109933.3-201ENST00000619095 188 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 U1.36-201ENST00000620684 176 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 SNORA27.1-201ENST00000362604 124 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.106-201ENST00000363189 100 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 SNORA63D-201ENST00000364359 132 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 SNORA4.2-201ENST00000365313 147 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RNA5SP475-201ENST00000410568 110 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 MTATP6P23-201ENST00000440153 476 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 HSPE1P13-201ENST00000451143 297 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 SNORD19B-201ENST00000459623 84 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC067942.3-201ENST00000512025 362 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 RNU6-107P-201ENST00000516643 102 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 MIR376A1-201ENST00000616574 68 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC090971.5-201ENST00000621102 293 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC006435.5-201ENST00000624486 112 ntBASIC0.87□□□□□ -2.27
SHROOM3Q8TF72 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC245060.5-201ENST00000610778 3293 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 MIR410-201ENST00000362222 80 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 MIR891A-201ENST00000401237 79 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC096644.2-201ENST00000429278 159 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC079140.2-201ENST00000506193 142 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC125232.2-201ENST00000592457 143 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AL512605.2-201ENST00000592972 256 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 AC005592.1-201ENST00000566527 1640 ntBASIC0.86□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.124-201ENST00000363339 93 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR515-2-201ENST00000384883 83 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR515-1-201ENST00000384884 83 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR194-1-201ENST00000384892 85 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 SNORA75.6-201ENST00000391318 127 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR190B-201ENST00000401119 79 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MCFD2P1-201ENST00000417812 300 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AC105758.1-201ENST00000506038 399 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 SNORA44.1-201ENST00000517031 108 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AC025647.1-201ENST00000517879 253 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AP001094.1-201ENST00000579805 193 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 VN1R91P-201ENST00000594377 169 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AC022441.3-201ENST00000605737 136 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR4272-201ENST00000635924 64 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 MIR338-201ENST00000636369 67 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 AL442644.1-201ENST00000454390 3105 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 Y_RNA.60-201ENST00000362831 98 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 SNORA33-201ENST00000363664 130 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 U3.8-201ENST00000363675 217 ntBASIC0.85□□□□□ -2.27
SHROOM3Q8TF72 RNU6-1297P-201ENST00000384415 104 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms