Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RNA5SP517-201ENST00000364724 117 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.296-201ENST00000364930 108 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.373-201ENST00000365600 103 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1264P-201ENST00000383891 107 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR520H-201ENST00000385126 88 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR873-201ENST00000401120 77 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 RNU6-613P-201ENST00000410412 108 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 DLGAP5P1-201ENST00000430307 464 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MTATP6P13-201ENST00000438531 667 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MTND4LP16-201ENST00000440828 295 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 RNU7-175P-201ENST00000515915 61 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.665-201ENST00000516177 98 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 AC093027.1-201ENST00000546698 429 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 ZNF519P2-201ENST00000557032 169 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR3612-201ENST00000579753 87 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR3908-201ENST00000579798 126 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR548AR-201ENST00000582191 57 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 MIR3672-201ENST00000584290 82 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 AF250324.2-201ENST00000608299 610 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 AC019193.3-201ENST00000609144 554 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.112-201ENST00000363250 102 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.172-201ENST00000363765 102 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 SNORD45.3-201ENST00000363836 72 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 SNORD50B-201ENST00000364995 70 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 RNU6-815P-201ENST00000384080 113 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR570-201ENST00000384917 97 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR489-201ENST00000384923 84 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR522-201ENST00000385071 87 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR613-201ENST00000385248 95 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MTCO2P27-201ENST00000420740 428 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 EIF1P2-201ENST00000428233 350 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 SUMO1P2-201ENST00000452524 304 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 RNU7-66P-201ENST00000459469 62 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 ACA59.1-201ENST00000515966 143 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1114P-201ENST00000516022 107 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 SNORD45.4-201ENST00000516629 73 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR4514-201ENST00000581410 57 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 AC073114.1-201ENST00000612027 490 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR6718-201ENST00000616153 80 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 AC104260.1-201ENST00000616660 539 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 AC092634.7-201ENST00000621022 103 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 MIR4251-201ENST00000635819 61 ntBASIC0.04□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.135-201ENST00000363439 95 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNA5SP62-201ENST00000363457 110 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1059P-201ENST00000363752 98 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-595P-201ENST00000363944 107 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-1322P-201ENST00000364309 107 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.253-201ENST00000364562 112 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU4-67P-201ENST00000364569 141 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-306P-201ENST00000384617 107 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 MIR518A1-201ENST00000385068 85 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-679P-201ENST00000391003 106 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 MLLT10P1-201ENST00000418346 262 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 ERLEC1P1-201ENST00000433806 578 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 UQCRBP2-201ENST00000447827 297 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 ELOCP24-201ENST00000456370 334 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 U8.22-201ENST00000459141 133 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 RNU6-329P-201ENST00000459618 107 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC093534.1-201ENST00000504977 132 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 MTND2P38-201ENST00000522536 667 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AP003327.1-201ENST00000529684 127 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC018448.1-201ENST00000552843 316 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC010525.2-201ENST00000590920 195 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC119751.7-201ENST00000600494 245 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC124303.1-201ENST00000605703 360 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AC092954.2-201ENST00000609103 430 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 AL355073.2-201ENST00000612106 557 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.03□□□□□ -2.4
ZNF439Q8NDP4 MIR410-201ENST00000362222 80 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 SNORD114-7-201ENST00000362520 77 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 RNY1P16-201ENST00000363063 111 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 Y_RNA.212-201ENST00000364177 102 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 RNY1P4-201ENST00000384595 115 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 MIR520F-201ENST00000384824 87 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 MIR193B-201ENST00000384907 83 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 USP9YP16-201ENST00000430287 407 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 AC005534.2-201ENST00000431047 433 ntBASIC0.02□□□□□ -2.41
ZNF439Q8NDP4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms