Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 U8.16-201ENST00000391279 133 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 AC236972.2-201ENST00000434979 310 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.632-201ENST00000459189 102 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-155P-201ENST00000516347 100 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-911P-201ENST00000516523 104 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.4□□□□□ -2.19
PRPF39Q86UA1 MIR8070-201ENST00000616510 88 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 AC068647.2-201ENST00000637380 353 ntBASIC1.4□□□□□ -2.19
PRPF39Q86UA1 RNU6-626P-201ENST00000363354 107 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 RNU6-392P-201ENST00000364926 101 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 AL031003.1-201ENST00000404229 172 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 MIR1287-201ENST00000408492 90 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.39□□□□□ -2.19
PRPF39Q86UA1 OR9P1P-201ENST00000496431 281 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 RNU6-322P-201ENST00000516010 103 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 RNU6-875P-201ENST00000516488 106 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 AL160236.1-201ENST00000556317 195 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 AC055872.1-201ENST00000570978 278 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 MIR548S-201ENST00000581352 82 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 MIR4801-201ENST00000582704 82 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 VN1R91P-201ENST00000594377 169 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
PRPF39Q86UA1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
PRPF39Q86UA1 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 RNU2-54P-201ENST00000410299 190 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 RNA5SP511-201ENST00000410487 115 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.38□□□□□ -2.19
PRPF39Q86UA1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.38□□□□□ -2.19
PRPF39Q86UA1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.38□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 SNORA25.9-201ENST00000365087 128 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AL354751.2-201ENST00000415471 210 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 MTND5P20-201ENST00000448677 143 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AC093850.1-201ENST00000454121 251 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AL358944.1-201ENST00000528537 144 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.37□□□□□ -2.19
PRPF39Q86UA1 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 AC240442.1-201ENST00000616055 283 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 U6.92-201ENST00000636464 89 ntBASIC1.37□□□□□ -2.19
PRPF39Q86UA1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PRPF39Q86UA1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.529-201ENST00000384586 119 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 MIR499A-201ENST00000384903 122 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 HSPE1P13-201ENST00000451143 297 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 SNORD19B-201ENST00000459623 84 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 RNU6-947P-201ENST00000516264 106 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.702-201ENST00000516843 96 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.36□□□□□ -2.19
PRPF39Q86UA1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.36□□□□□ -2.19
PRPF39Q86UA1 SNORD68-201ENST00000363214 84 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 RNU6-708P-201ENST00000384217 107 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
PRPF39Q86UA1 AL162725.1-201ENST00000435405 301 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 RPEP5-201ENST00000441137 268 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.35□□□□□ -2.19
PRPF39Q86UA1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 AC138305.3-201ENST00000624988 240 ntBASIC1.35□□□□□ -2.19
PRPF39Q86UA1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RNU4-41P-201ENST00000364426 143 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 Y_RNA.263-201ENST00000364659 114 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 HMGN1P7-201ENST00000491722 313 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.34□□□□□ -2.19
PRPF39Q86UA1 FGF7P4-201ENST00000509595 295 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RNU6-507P-201ENST00000516045 100 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AC090049.2-201ENST00000550377 109 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.34□□□□□ -2.19
PRPF39Q86UA1 RPS29P30-201ENST00000600975 111 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AL138825.1-201ENST00000618587 192 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 AC091895.1-201ENST00000624494 256 ntBASIC1.34□□□□□ -2.19
PRPF39Q86UA1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
PRPF39Q86UA1 SNORA2.2-201ENST00000365473 135 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.33□□□□□ -2.2
PRPF39Q86UA1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
PRPF39Q86UA1 AC104332.1-201ENST00000440471 797 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 RPS4XP11-201ENST00000446897 772 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 CHEK2P4-201ENST00000450340 246 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.33□□□□□ -2.2
PRPF39Q86UA1 AC093027.1-201ENST00000546698 429 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms