Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 SNORD116-28-201ENST00000516123 91 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 RNU7-115P-201ENST00000516433 55 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 AC011604.1-201ENST00000545978 196 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 AC079600.2-201ENST00000550076 130 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 BX284668.6-201ENST00000606899 438 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 AC078938.1-201ENST00000620993 318 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TMEM88Q6PEY1 RNU6-899P-201ENST00000363947 107 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 MIR196B-201ENST00000384852 84 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 MIR520G-201ENST00000385064 90 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 RNA5SP184-201ENST00000411071 108 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 UBE2DNL-203ENST00000474922 222 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 RPL36AP21-201ENST00000490372 323 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 MRPS17P9-201ENST00000511924 393 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 MIR5692C2-201ENST00000577959 77 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 AC005357.1-201ENST00000588399 301 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 AL929325.1-201ENST00000603096 117 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 AP003357.1-201ENST00000604497 148 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 AC013791.1-201ENST00000616619 62 ntBASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM88Q6PEY1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 SNORA1B-201ENST00000362535 133 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNU6-859P-201ENST00000362728 107 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 SNORA63D-201ENST00000364359 132 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNU4-10P-201ENST00000364383 140 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.478-201ENST00000384358 107 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.500-201ENST00000384466 111 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 SNORA36B-201ENST00000410438 131 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNA5SP21-201ENST00000410917 96 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 AC063976.3-201ENST00000426849 329 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 HSPE1P9-201ENST00000440046 311 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNU7-94P-201ENST00000459576 63 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 RNA5SP282-201ENST00000516355 108 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 AL078604.3-201ENST00000615580 211 ntBASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM88Q6PEY1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 AC062016.1-201ENST00000355719 319 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU1-112P-201ENST00000364401 164 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 SNORA72-201ENST00000384339 132 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 MT-TG-201ENST00000387429 68 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU2-52P-201ENST00000410680 190 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 AC069257.2-201ENST00000441819 155 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU2-56P-201ENST00000516826 190 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU7-116P-201ENST00000516940 62 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 RNU6-341P-201ENST00000516973 96 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 MIR8054-201ENST00000620877 86 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 AL136360.1-201ENST00000503377 1900 ntBASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM88Q6PEY1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
TMEM88Q6PEY1 AC100821.1-201ENST00000523153 2479 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 Y_RNA.292-201ENST00000364904 97 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 MIR9-1-201ENST00000385198 89 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 RNU6-440P-201ENST00000390882 105 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 RNU11-5P-201ENST00000391216 129 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 MIR1278-201ENST00000408753 81 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 RNU6-383P-201ENST00000410864 94 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 SNORA31.10-201ENST00000516482 106 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 AC091544.4-201ENST00000555268 342 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 AC127455.1-201ENST00000565496 145 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
TMEM88Q6PEY1 AC090425.1-201ENST00000610007 140 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms