Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AL354751.2-201ENST00000415471 210 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 BTF3P4-201ENST00000418852 495 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 RNU7-152P-201ENST00000458982 64 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 AL049830.1-201ENST00000468034 425 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 RNU6-917P-201ENST00000516294 104 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.24□□□□□ -2.21
CASC4Q6P4E1 AL358944.1-201ENST00000528537 144 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
CASC4Q6P4E1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CASC4Q6P4E1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 Y_RNA.529-201ENST00000384586 119 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 MTCO2P27-201ENST00000420740 428 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 AL162725.1-201ENST00000435405 301 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 Z98949.2-201ENST00000440996 144 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 RPEP5-201ENST00000441137 268 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 AC093019.1-201ENST00000443135 252 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 SNORD19B-201ENST00000459623 84 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 RNU7-12P-201ENST00000516030 62 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 RNU6-507P-201ENST00000516045 100 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 SNORA70.12-201ENST00000516084 153 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.23□□□□□ -2.21
CASC4Q6P4E1 AC006600.1-201ENST00000572529 153 ntBASIC1.23□□□□□ -2.21
CASC4Q6P4E1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CASC4Q6P4E1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CASC4Q6P4E1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 SNORD116-13-201ENST00000384408 92 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 RPS4XP11-201ENST00000446897 772 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.22□□□□□ -2.21
CASC4Q6P4E1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.22□□□□□ -2.21
CASC4Q6P4E1 AC093027.1-201ENST00000546698 429 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 MIR4801-201ENST00000582704 82 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.22□□□□□ -2.21
CASC4Q6P4E1 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 VN1R91P-201ENST00000594377 169 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 AL117336.2-201ENST00000602435 335 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
CASC4Q6P4E1 MIR4272-201ENST00000635924 64 ntBASIC1.22□□□□□ -2.21
CASC4Q6P4E1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.263-201ENST00000364659 114 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 RNU6-1009P-201ENST00000390996 107 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 RNU2-61P-201ENST00000411069 191 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.21□□□□□ -2.22
CASC4Q6P4E1 RNU6-155P-201ENST00000516347 100 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 SNORD116.3-201ENST00000517176 78 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 AC090049.2-201ENST00000550377 109 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
CASC4Q6P4E1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.21□□□□□ -2.22
CASC4Q6P4E1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
CASC4Q6P4E1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CASC4Q6P4E1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
CASC4Q6P4E1 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 MTND5P20-201ENST00000448677 143 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 AL163540.1-201ENST00000485382 386 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.2□□□□□ -2.22
CASC4Q6P4E1 MIR548S-201ENST00000581352 82 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 AC104985.2-201ENST00000620598 500 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
CASC4Q6P4E1 AC091925.1-201ENST00000623204 462 ntBASIC1.2□□□□□ -2.22
CASC4Q6P4E1 RNU6-324P-201ENST00000363957 106 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 SNORA2.2-201ENST00000365473 135 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AF228730.4-201ENST00000421457 183 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AC092473.1-201ENST00000441098 221 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.19□□□□□ -2.22
CASC4Q6P4E1 RNU6-436P-201ENST00000516171 114 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.702-201ENST00000516843 96 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AC112487.2-201ENST00000637950 304 ntBASIC1.19□□□□□ -2.22
CASC4Q6P4E1 AL391987.6-201ENST00000305671 199 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 RNY3P1-201ENST00000365085 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 RNY3-201ENST00000365484 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 RNY3P14-201ENST00000384309 102 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.18□□□□□ -2.22
CASC4Q6P4E1 AL603825.1-201ENST00000438481 80 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 AC104332.1-201ENST00000440471 797 ntBASIC1.18□□□□□ -2.22
CASC4Q6P4E1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms