Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 FGF7P1-201ENST00000582820 288 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 AC013437.2-201ENST00000639587 677 ntBASIC-1.29□□□□□ -2.62
CCDC58Q4VC31 SNORA63C-201ENST00000364578 129 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 SNORA51.10-201ENST00000384418 136 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 AC092447.3-201ENST00000426027 686 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 AL365184.2-201ENST00000431139 435 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 SPINT5P-201ENST00000448174 155 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 SCARNA18-201ENST00000459004 134 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 RNU7-185P-201ENST00000459215 60 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 AC046134.1-201ENST00000514454 666 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 RNA5SP47-201ENST00000517230 109 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 AC090572.1-201ENST00000519251 160 ntBASIC-1.3□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 RNU6-407P-201ENST00000365280 104 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 HMGN2P32-201ENST00000444648 269 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 PRDX4P1-201ENST00000507189 574 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 RNA5SP66-201ENST00000517178 101 ntBASIC-1.31□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 MIR570-201ENST00000384917 97 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 MIR450B-201ENST00000401182 78 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 MTND3P9-201ENST00000429526 346 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 MTATP6P23-201ENST00000440153 476 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 RNU6-135P-201ENST00000516769 101 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 AC010332.2-201ENST00000613083 1904 ntBASIC-1.32□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 MIR635-201ENST00000384830 98 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 MRPL42P2-201ENST00000403169 426 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AL358934.1-201ENST00000432346 324 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AL137792.2-201ENST00000443484 235 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AC093303.1-201ENST00000514549 295 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 SNORD45.4-201ENST00000516629 73 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 SNORA27.4-201ENST00000516650 95 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AP003181.2-201ENST00000528941 181 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AC138749.4-201ENST00000563970 127 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AGGF1P4-201ENST00000568249 801 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 RNU6-85P-201ENST00000605989 107 ntBASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.33□□□□□ -2.62
CCDC58Q4VC31 SNORD115-8-201ENST00000363856 82 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 SNORD115-38-201ENST00000365037 82 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 RNU6-117P-201ENST00000365415 107 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 SNORD70.1-201ENST00000391007 85 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 MIR1265-201ENST00000408444 86 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 RNU7-73P-201ENST00000458743 63 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 AC018710.1-201ENST00000506509 158 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 SNORA25.14-201ENST00000516481 132 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 MTND1P35-201ENST00000526739 508 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 MTCO3P23-201ENST00000561363 289 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 MTND1P7-201ENST00000632801 297 ntBASIC-1.34□□□□□ -2.62
CCDC58Q4VC31 SNORA27.1-201ENST00000362604 124 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 RNU6-727P-201ENST00000363592 107 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 SNORD116-12-201ENST00000384468 92 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 MIR876-201ENST00000401147 81 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 MIR3941-201ENST00000582572 103 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 AC121247.2-201ENST00000604776 136 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 SNORA70.25-201ENST00000612741 95 ntBASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.35□□□□□ -2.63
CCDC58Q4VC31 SNORD116.1-201ENST00000365628 92 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 MIR215-201ENST00000384858 110 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 MIR7-2-201ENST00000384970 110 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 RNU6-881P-201ENST00000516813 102 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 MTND4LP18-201ENST00000526864 291 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 AL359999.1-201ENST00000604513 294 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.36□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 RNA5SP25-201ENST00000410815 110 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AC091959.1-201ENST00000495857 238 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AC006600.1-201ENST00000572529 153 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AL162376.1-201ENST00000624117 175 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 AC127459.3-201ENST00000624328 466 ntBASIC-1.37□□□□□ -2.63
CCDC58Q4VC31 RNY1P12-201ENST00000364251 105 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 MIR5706-201ENST00000579841 80 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 MIR378D2-201ENST00000580636 98 ntBASIC-1.38□□□□□ -2.63
CCDC58Q4VC31 BNIP3P40-201ENST00000596017 556 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms