Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 MIR587-201ENST00000384845 96 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU6-550P-201ENST00000391057 101 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF1Q10570 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC116353.2-201ENST00000505332 712 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNA5SP20-201ENST00000515976 84 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 SNORA18.4-201ENST00000516440 124 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU6-612P-201ENST00000516909 102 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
CPSF1Q10570 FGF7P1-201ENST00000582820 288 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC016597.2-201ENST00000613256 341 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC068880.4-201ENST00000623082 495 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC022418.1-201ENST00000624118 445 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 MIR198-201ENST00000637333 62 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 AC068137.4-201ENST00000638485 296 ntBASIC-1.08□□□□□ -2.58
CPSF1Q10570 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 SNORA63C-201ENST00000364578 129 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.09□□□□□ -2.58
CPSF1Q10570 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 MIR563-201ENST00000385080 79 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.09□□□□□ -2.58
CPSF1Q10570 AL359672.1-201ENST00000442302 409 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 AC109327.2-201ENST00000448339 378 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 U8.21-201ENST00000459536 136 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.09□□□□□ -2.58
CPSF1Q10570 RNU6-135P-201ENST00000516769 101 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 AC006600.1-201ENST00000572529 153 ntBASIC-1.09□□□□□ -2.58
CPSF1Q10570 SNORA20B-201ENST00000384220 132 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 MIR215-201ENST00000384858 110 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 MIR570-201ENST00000384917 97 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 SNORA75.1-201ENST00000391130 148 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 MIR1257-201ENST00000408490 117 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.1□□□□□ -2.59
CPSF1Q10570 MTCO2P11-201ENST00000431069 680 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC010424.1-201ENST00000506336 297 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 PRDX4P1-201ENST00000507189 574 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.1□□□□□ -2.59
CPSF1Q10570 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 SNORD45.4-201ENST00000516629 73 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.1□□□□□ -2.59
CPSF1Q10570 MIR5706-201ENST00000579841 80 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC125232.2-201ENST00000592457 143 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC006380.1-201ENST00000603598 186 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 AC002044.1-201ENST00000606707 158 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 U7.6-201ENST00000610841 64 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 RMST_3.1-201ENST00000611651 109 ntBASIC-1.1□□□□□ -2.59
CPSF1Q10570 RNU6-811P-201ENST00000384069 107 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 SNORA51.10-201ENST00000384418 136 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 RNU6-393P-201ENST00000384475 107 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 MIR601-201ENST00000385256 79 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 MCFD2P1-201ENST00000417812 300 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 AL358934.1-201ENST00000432346 324 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.11□□□□□ -2.59
CPSF1Q10570 SNORA27.4-201ENST00000516650 95 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 AC069113.1-201ENST00000517763 267 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.11□□□□□ -2.59
CPSF1Q10570 MTND4P33-201ENST00000556706 766 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 AC009159.2-201ENST00000617603 606 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 MIR6738-201ENST00000619620 64 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 MTND1P7-201ENST00000632801 297 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 U6.114-201ENST00000636407 96 ntBASIC-1.11□□□□□ -2.59
CPSF1Q10570 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 RNU6-434P-201ENST00000384376 107 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.12□□□□□ -2.59
CPSF1Q10570 ELOCP4-201ENST00000420090 333 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 AC138749.4-201ENST00000563970 127 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 MIR4324-201ENST00000584846 72 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 AL590491.3-201ENST00000610731 82 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.12□□□□□ -2.59
CPSF1Q10570 AC022306.2-201ENST00000617563 647 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 AC013437.2-201ENST00000639587 677 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 MTND5P17-201ENST00000418405 1603 ntBASIC-1.12□□□□□ -2.59
CPSF1Q10570 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
CPSF1Q10570 MIR655-201ENST00000362159 97 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 MIR101-2-201ENST00000362195 79 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 RNU6-407P-201ENST00000365280 104 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.13□□□□□ -2.59
CPSF1Q10570 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.13□□□□□ -2.59
CPSF1Q10570 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 AF186996.7-201ENST00000492781 209 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 AC093303.1-201ENST00000514549 295 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 SNORA25.14-201ENST00000516481 132 ntBASIC-1.13□□□□□ -2.59
CPSF1Q10570 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 SNORD28-201ENST00000384706 75 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC018865.2-201ENST00000423631 129 ntBASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.14□□□□□ -2.59
CPSF1Q10570 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.14□□□□□ -2.59
CPSF1Q10570 AC013244.3-201ENST00000605614 388 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms