Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 RNU6-1310P-201ENST00000384153 107 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 RNU6-439P-201ENST00000384188 106 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 MIR548P-201ENST00000408336 84 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 RNU6-130P-201ENST00000411112 103 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AL606517.2-201ENST00000442855 241 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 snoU13.9-201ENST00000458927 103 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 SNORA25.10-201ENST00000515926 124 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.39□□□□□ -2.19
HMGCS2P54868 AC024995.1-201ENST00000523014 93 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AC040926.1-201ENST00000530195 238 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AC023157.2-201ENST00000540596 141 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGCS2P54868 MIR4423-201ENST00000580922 80 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 MIR4422-201ENST00000581938 83 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 PART1_1.1-201ENST00000611761 217 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 AC006435.5-201ENST00000624486 112 ntBASIC1.39□□□□□ -2.19
HMGCS2P54868 RNU6-1266P-201ENST00000362794 105 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 Y_RNA.124-201ENST00000363339 93 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 Y_RNA.466-201ENST00000384294 113 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 MIR520A-201ENST00000384862 85 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 EBAG9P1-201ENST00000418955 543 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 RPEP5-201ENST00000441137 268 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 MRPS10P1-201ENST00000448483 130 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 RPS29P1-201ENST00000465274 159 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 AL137100.2-201ENST00000555786 315 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.38□□□□□ -2.19
HMGCS2P54868 MIR4438-201ENST00000585271 93 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 AC022217.4-201ENST00000604389 163 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 AL121655.1-201ENST00000605811 308 ntBASIC1.38□□□□□ -2.19
HMGCS2P54868 Y_RNA.11-201ENST00000362375 109 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNU6-414P-201ENST00000363705 104 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNU4-76P-201ENST00000364509 141 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 SNORD14.1-201ENST00000365609 90 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 MIR515-2-201ENST00000384883 83 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 MIR515-1-201ENST00000384884 83 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNA5SP109-201ENST00000391010 116 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNU2-54P-201ENST00000410299 190 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGCS2P54868 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGCS2P54868 HSPE1P9-201ENST00000440046 311 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 AC073910.1-201ENST00000445047 438 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 RNU7-99P-201ENST00000516271 62 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGCS2P54868 MIR3684-201ENST00000579779 74 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 AC044792.1-201ENST00000593294 196 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 AC005176.2-201ENST00000596933 147 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 AL359075.3-201ENST00000613288 217 ntBASIC1.37□□□□□ -2.19
HMGCS2P54868 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMGCS2P54868 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGCS2P54868 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HMGCS2P54868 SNORA72.2-201ENST00000365028 127 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 Y_RNA.446-201ENST00000384178 104 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 Y_RNA.570-201ENST00000384750 101 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RNU6-823P-201ENST00000391042 103 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 MRPL42P3-201ENST00000401492 326 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RNU6-1186P-201ENST00000410429 97 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RPS27P22-201ENST00000478056 241 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 AC010655.3-201ENST00000478818 450 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 AC097462.1-201ENST00000514125 324 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RNA5SP20-201ENST00000515976 84 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RNU1-142P-201ENST00000516682 145 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 AC022441.3-201ENST00000605737 136 ntBASIC1.36□□□□□ -2.19
HMGCS2P54868 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HMGCS2P54868 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGCS2P54868 Y_RNA.230-201ENST00000364348 109 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-450P-201ENST00000364654 107 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-117P-201ENST00000365415 107 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-1227P-201ENST00000383981 107 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 MIR873-201ENST00000401120 77 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 U8.20-201ENST00000459445 131 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-436P-201ENST00000516171 114 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 SNORA31.10-201ENST00000516482 106 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-1137P-201ENST00000517073 99 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 RNU6-988P-201ENST00000519081 107 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 MIR4295-201ENST00000585286 85 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 AL390123.1-201ENST00000603216 237 ntBASIC1.35□□□□□ -2.19
HMGCS2P54868 SNORD114-7-201ENST00000362520 77 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 SNORD81.1-201ENST00000363064 77 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNU4-50P-201ENST00000364361 141 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNU6-1175P-201ENST00000365200 107 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNU6-407P-201ENST00000365280 104 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 Y_RNA.462-201ENST00000384268 102 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 Y_RNA.471-201ENST00000384312 102 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 Y_RNA.526-201ENST00000384572 110 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 SNORA12.1-201ENST00000390873 148 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNA5SP323-201ENST00000391094 133 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AL031003.1-201ENST00000404229 172 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC069257.2-201ENST00000441819 155 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RPS26P55-201ENST00000471178 356 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms