Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR548I1-201ENST00000408810 149 ntBASIC2.25□□□□□ -2.05
COPB1P53618 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
COPB1P53618 BTF3P11-201ENST00000426582 477 ntBASIC2.25□□□□□ -2.05
COPB1P53618 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.25□□□□□ -2.05
COPB1P53618 MTND5P15-201ENST00000434246 349 ntBASIC2.25□□□□□ -2.05
COPB1P53618 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.25□□□□□ -2.05
COPB1P53618 RNU1-131P-201ENST00000458943 161 ntBASIC2.25□□□□□ -2.05
COPB1P53618 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
COPB1P53618 RNA5SP20-201ENST00000515976 84 ntBASIC2.25□□□□□ -2.05
COPB1P53618 RNU6-1337P-201ENST00000516525 95 ntBASIC2.25□□□□□ -2.05
COPB1P53618 AC027419.1-201ENST00000522976 328 ntBASIC2.25□□□□□ -2.05
COPB1P53618 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.25□□□□□ -2.05
COPB1P53618 AC004792.1-201ENST00000614523 137 ntBASIC2.25□□□□□ -2.05
COPB1P53618 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COPB1P53618 RNU6-653P-201ENST00000363074 106 ntBASIC2.24□□□□□ -2.05
COPB1P53618 RNU6-117P-201ENST00000365415 107 ntBASIC2.24□□□□□ -2.05
COPB1P53618 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
COPB1P53618 SNORA11.4-201ENST00000408823 129 ntBASIC2.24□□□□□ -2.05
COPB1P53618 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
COPB1P53618 RPS20P10-201ENST00000451209 253 ntBASIC2.24□□□□□ -2.05
COPB1P53618 AL138752.1-201ENST00000452964 351 ntBASIC2.24□□□□□ -2.05
COPB1P53618 Y_RNA.644-201ENST00000459006 113 ntBASIC2.24□□□□□ -2.05
COPB1P53618 Y_RNA.674-201ENST00000516362 113 ntBASIC2.24□□□□□ -2.05
COPB1P53618 SUMO2P18-201ENST00000518873 252 ntBASIC2.24□□□□□ -2.05
COPB1P53618 AL365265.1-201ENST00000621045 234 ntBASIC2.24□□□□□ -2.05
COPB1P53618 CENPCP1-201ENST00000533085 2578 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
COPB1P53618 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COPB1P53618 Y_RNA.287-201ENST00000364853 94 ntBASIC2.23□□□□□ -2.05
COPB1P53618 RNU6-407P-201ENST00000365280 104 ntBASIC2.23□□□□□ -2.05
COPB1P53618 SNORD116-13-201ENST00000384408 92 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AL353689.1-201ENST00000438895 199 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.23□□□□□ -2.05
COPB1P53618 AC011406.1-201ENST00000512440 370 ntBASIC2.23□□□□□ -2.05
COPB1P53618 RNU6-182P-201ENST00000516970 105 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.23□□□□□ -2.05
COPB1P53618 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AC022202.1-201ENST00000613515 211 ntBASIC2.23□□□□□ -2.05
COPB1P53618 AC013791.1-201ENST00000616619 62 ntBASIC2.23□□□□□ -2.05
COPB1P53618 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.23□□□□□ -2.05
COPB1P53618 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COPB1P53618 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
COPB1P53618 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COPB1P53618 RNU6-1164P-201ENST00000364428 107 ntBASIC2.22□□□□□ -2.05
COPB1P53618 RNU6-482P-201ENST00000391068 107 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
COPB1P53618 HMGN2P34-201ENST00000437647 269 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AC104332.1-201ENST00000440471 797 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.22□□□□□ -2.05
COPB1P53618 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.22□□□□□ -2.05
COPB1P53618 RPL36AP21-201ENST00000490372 323 ntBASIC2.22□□□□□ -2.05
COPB1P53618 RNY3P16-201ENST00000516338 101 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AC024405.2-202ENST00000532731 184 ntBASIC2.22□□□□□ -2.05
COPB1P53618 MIR5692C2-201ENST00000577959 77 ntBASIC2.22□□□□□ -2.05
COPB1P53618 Z83818.1-201ENST00000603584 150 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AC004832.4-201ENST00000608952 331 ntBASIC2.22□□□□□ -2.05
COPB1P53618 AC098479.1-201ENST00000609225 154 ntBASIC2.22□□□□□ -2.05
COPB1P53618 FTX_2.1-201ENST00000618816 94 ntBASIC2.22□□□□□ -2.05
COPB1P53618 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
COPB1P53618 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COPB1P53618 AC134026.1-201ENST00000623249 2239 ntBASIC2.22□□□□□ -2.05
COPB1P53618 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
COPB1P53618 RNU1-22P-201ENST00000363334 158 ntBASIC2.21□□□□□ -2.06
COPB1P53618 SNORA38-201ENST00000363946 132 ntBASIC2.21□□□□□ -2.06
COPB1P53618 RNU1-96P-201ENST00000364163 162 ntBASIC2.21□□□□□ -2.06
COPB1P53618 RNU6-47P-201ENST00000383866 107 ntBASIC2.21□□□□□ -2.06
COPB1P53618 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
COPB1P53618 RNU6-918P-201ENST00000391219 106 ntBASIC2.21□□□□□ -2.06
COPB1P53618 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
COPB1P53618 RNU7-141P-201ENST00000459304 62 ntBASIC2.21□□□□□ -2.06
COPB1P53618 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.21□□□□□ -2.06
COPB1P53618 AP005660.1-201ENST00000522972 293 ntBASIC2.21□□□□□ -2.06
COPB1P53618 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COPB1P53618 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
COPB1P53618 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
COPB1P53618 AL353149.1-201ENST00000610667 244 ntBASIC2.21□□□□□ -2.06
COPB1P53618 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
COPB1P53618 U6.73-201ENST00000619194 103 ntBASIC2.21□□□□□ -2.06
COPB1P53618 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COPB1P53618 snoU2-30.2-201ENST00000362805 70 ntBASIC2.2□□□□□ -2.06
COPB1P53618 RNU6-899P-201ENST00000363947 107 ntBASIC2.2□□□□□ -2.06
COPB1P53618 RNA5SP493-201ENST00000364115 91 ntBASIC2.2□□□□□ -2.06
COPB1P53618 Y_RNA.262-201ENST00000364641 102 ntBASIC2.2□□□□□ -2.06
COPB1P53618 U8.7-201ENST00000364940 136 ntBASIC2.2□□□□□ -2.06
COPB1P53618 RNU6-160P-201ENST00000384591 107 ntBASIC2.2□□□□□ -2.06
COPB1P53618 MTCO2P33-201ENST00000402100 465 ntBASIC2.2□□□□□ -2.06
COPB1P53618 AL117342.1-201ENST00000404861 406 ntBASIC2.2□□□□□ -2.06
COPB1P53618 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.2□□□□□ -2.06
COPB1P53618 Y_RNA.793-201ENST00000411222 111 ntBASIC2.2□□□□□ -2.06
COPB1P53618 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.2□□□□□ -2.06
COPB1P53618 PIGPP3-201ENST00000425307 415 ntBASIC2.2□□□□□ -2.06
COPB1P53618 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
COPB1P53618 RNU7-120P-201ENST00000459334 63 ntBASIC2.2□□□□□ -2.06
COPB1P53618 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.2□□□□□ -2.06
COPB1P53618 RPS27P22-201ENST00000478056 241 ntBASIC2.2□□□□□ -2.06
COPB1P53618 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.2□□□□□ -2.06
COPB1P53618 RNU6-63P-201ENST00000516690 95 ntBASIC2.2□□□□□ -2.06
COPB1P53618 MIR4308-201ENST00000580634 81 ntBASIC2.2□□□□□ -2.06
COPB1P53618 MIR4438-201ENST00000585271 93 ntBASIC2.2□□□□□ -2.06
COPB1P53618 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms