Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC104332.1-201ENST00000440471 797 ntBASIC0.82□□□□□ -2.28
CASP4P49662 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.82□□□□□ -2.28
CASP4P49662 AC069439.1-201ENST00000494739 167 ntBASIC0.82□□□□□ -2.28
CASP4P49662 CYCTP-201ENST00000504253 315 ntBASIC0.82□□□□□ -2.28
CASP4P49662 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
CASP4P49662 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CASP4P49662 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CASP4P49662 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
CASP4P49662 SNORA75.4-201ENST00000391278 119 ntBASIC0.81□□□□□ -2.28
CASP4P49662 FCF1P9-201ENST00000412546 282 ntBASIC0.81□□□□□ -2.28
CASP4P49662 Z98949.2-201ENST00000440996 144 ntBASIC0.81□□□□□ -2.28
CASP4P49662 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
CASP4P49662 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.81□□□□□ -2.28
CASP4P49662 ELOCP24-201ENST00000456370 334 ntBASIC0.81□□□□□ -2.28
CASP4P49662 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.81□□□□□ -2.28
CASP4P49662 SNORA70.12-201ENST00000516084 153 ntBASIC0.81□□□□□ -2.28
CASP4P49662 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.81□□□□□ -2.28
CASP4P49662 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
CASP4P49662 AC004832.4-201ENST00000608952 331 ntBASIC0.81□□□□□ -2.28
CASP4P49662 MIR1244-1-201ENST00000612829 85 ntBASIC0.81□□□□□ -2.28
CASP4P49662 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.81□□□□□ -2.28
CASP4P49662 AC027279.3-201ENST00000625055 122 ntBASIC0.81□□□□□ -2.28
CASP4P49662 MIR1244-3-201ENST00000635744 85 ntBASIC0.81□□□□□ -2.28
CASP4P49662 MIR1244-2-201ENST00000636449 85 ntBASIC0.81□□□□□ -2.28
CASP4P49662 MIR1244-4-202ENST00000636813 85 ntBASIC0.81□□□□□ -2.28
CASP4P49662 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
CASP4P49662 Y_RNA.191-201ENST00000363972 113 ntBASIC0.8□□□□□ -2.28
CASP4P49662 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
CASP4P49662 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
CASP4P49662 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.8□□□□□ -2.28
CASP4P49662 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.8□□□□□ -2.28
CASP4P49662 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.8□□□□□ -2.28
CASP4P49662 MIR2053-201ENST00000459295 91 ntBASIC0.8□□□□□ -2.28
CASP4P49662 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
CASP4P49662 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.8□□□□□ -2.28
CASP4P49662 SNORD111.1-201ENST00000516421 86 ntBASIC0.8□□□□□ -2.28
CASP4P49662 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.8□□□□□ -2.28
CASP4P49662 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.8□□□□□ -2.28
CASP4P49662 MIR4452-201ENST00000583004 71 ntBASIC0.8□□□□□ -2.28
CASP4P49662 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
CASP4P49662 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
CASP4P49662 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CASP4P49662 SNORD115-30-201ENST00000364117 82 ntBASIC0.79□□□□□ -2.28
CASP4P49662 RNU6-767P-201ENST00000384132 107 ntBASIC0.79□□□□□ -2.28
CASP4P49662 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
CASP4P49662 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CASP4P49662 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
CASP4P49662 AL354751.2-201ENST00000415471 210 ntBASIC0.79□□□□□ -2.28
CASP4P49662 MTND4P28-201ENST00000426217 387 ntBASIC0.79□□□□□ -2.28
CASP4P49662 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
CASP4P49662 AL162725.1-201ENST00000435405 301 ntBASIC0.79□□□□□ -2.28
CASP4P49662 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
CASP4P49662 RNU7-30P-201ENST00000516835 62 ntBASIC0.79□□□□□ -2.28
CASP4P49662 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
CASP4P49662 AL669831.3-213ENST00000636676 183 ntBASIC0.79□□□□□ -2.28
CASP4P49662 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
CASP4P49662 AC008163.1-202ENST00000636004 2889 ntBASIC0.79□□□□□ -2.28
CASP4P49662 RNU6-99P-201ENST00000364721 107 ntBASIC0.78□□□□□ -2.28
CASP4P49662 RNU6-163P-201ENST00000384396 106 ntBASIC0.78□□□□□ -2.28
CASP4P49662 RNU6-136P-201ENST00000384663 107 ntBASIC0.78□□□□□ -2.28
CASP4P49662 RNU6-1105P-201ENST00000384774 107 ntBASIC0.78□□□□□ -2.28
CASP4P49662 Y_RNA.577-201ENST00000384794 101 ntBASIC0.78□□□□□ -2.28
CASP4P49662 MIR452-201ENST00000385020 85 ntBASIC0.78□□□□□ -2.28
CASP4P49662 MIR625-201ENST00000385047 85 ntBASIC0.78□□□□□ -2.28
CASP4P49662 SNORA69.1-201ENST00000390904 137 ntBASIC0.78□□□□□ -2.28
CASP4P49662 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.78□□□□□ -2.28
CASP4P49662 FGF7P6-202ENST00000451282 293 ntBASIC0.78□□□□□ -2.28
CASP4P49662 AC245047.8-201ENST00000456455 284 ntBASIC0.78□□□□□ -2.28
CASP4P49662 RNU7-90P-201ENST00000459216 62 ntBASIC0.78□□□□□ -2.28
CASP4P49662 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.78□□□□□ -2.28
CASP4P49662 RNU6-408P-201ENST00000515910 100 ntBASIC0.78□□□□□ -2.28
CASP4P49662 RNU6-63P-201ENST00000516690 95 ntBASIC0.78□□□□□ -2.28
CASP4P49662 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
CASP4P49662 AC023442.1-201ENST00000531247 422 ntBASIC0.78□□□□□ -2.28
CASP4P49662 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CASP4P49662 CASC19-280ENST00000642102 1351 ntBASIC0.78□□□□□ -2.28
CASP4P49662 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.78□□□□□ -2.28
CASP4P49662 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
CASP4P49662 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
CASP4P49662 Y_RNA.166-201ENST00000363730 102 ntBASIC0.77□□□□□ -2.29
CASP4P49662 U8.5-201ENST00000364528 136 ntBASIC0.77□□□□□ -2.29
CASP4P49662 Y_RNA.336-201ENST00000365307 109 ntBASIC0.77□□□□□ -2.29
CASP4P49662 RNU6-969P-201ENST00000383900 105 ntBASIC0.77□□□□□ -2.29
CASP4P49662 SNORD116-13-201ENST00000384408 92 ntBASIC0.77□□□□□ -2.29
CASP4P49662 MIR499A-201ENST00000384903 122 ntBASIC0.77□□□□□ -2.29
CASP4P49662 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
CASP4P49662 MTND1P4-201ENST00000435196 415 ntBASIC0.77□□□□□ -2.29
CASP4P49662 Y_RNA.635-201ENST00000459041 101 ntBASIC0.77□□□□□ -2.29
CASP4P49662 RNU7-21P-201ENST00000459430 62 ntBASIC0.77□□□□□ -2.29
CASP4P49662 AC117454.1-201ENST00000491120 168 ntBASIC0.77□□□□□ -2.29
CASP4P49662 RPS26P48-201ENST00000491713 339 ntBASIC0.77□□□□□ -2.29
CASP4P49662 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.77□□□□□ -2.29
CASP4P49662 Y_RNA.676-201ENST00000516393 96 ntBASIC0.77□□□□□ -2.29
CASP4P49662 Y_RNA.691-201ENST00000516611 103 ntBASIC0.77□□□□□ -2.29
CASP4P49662 RNU6-1116P-201ENST00000517269 99 ntBASIC0.77□□□□□ -2.29
CASP4P49662 CYP3A137P-201ENST00000562436 69 ntBASIC0.77□□□□□ -2.29
CASP4P49662 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
CASP4P49662 AC006380.1-201ENST00000603598 186 ntBASIC0.77□□□□□ -2.29
CASP4P49662 AL096861.1-201ENST00000610899 123 ntBASIC0.77□□□□□ -2.29
CASP4P49662 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms