Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.59□□□□□ -2.15
NKX2-1P43699 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
NKX2-1P43699 AC018630.2-201ENST00000534866 2403 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.58□□□□□ -2.16
NKX2-1P43699 AL356292.1-201ENST00000283110 373 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 AL391987.6-201ENST00000305671 199 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 RNU6-238P-201ENST00000363313 106 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 Y_RNA.124-201ENST00000363339 93 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 Y_RNA.217-201ENST00000364214 105 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
NKX2-1P43699 RNU6-196P-201ENST00000384315 107 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 MIR520G-201ENST00000385064 90 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 Y_RNA.602-201ENST00000410535 92 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 AL139156.1-201ENST00000412785 841 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 HSPE1P9-201ENST00000440046 311 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 RPS27P1-201ENST00000450552 247 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 Y_RNA.641-201ENST00000459414 105 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 AL163195.1-201ENST00000496941 348 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 RNU6-1337P-201ENST00000516525 95 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 RNU6-341P-201ENST00000516973 96 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.58□□□□□ -2.16
NKX2-1P43699 MIR1273D-201ENST00000577266 86 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 MIR5089-201ENST00000580047 84 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 MIR5688-201ENST00000580619 83 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 DEFB117-201ENST00000602356 141 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 AC037487.3-201ENST00000606668 112 ntBASIC1.58□□□□□ -2.16
NKX2-1P43699 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
NKX2-1P43699 RNU6-324P-201ENST00000363957 106 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 Y_RNA.288-201ENST00000364854 92 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 Y_RNA.461-201ENST00000384263 103 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 Y_RNA.500-201ENST00000384466 111 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 SNORA11.2-201ENST00000408318 127 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 RNA5SP425-201ENST00000410336 112 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 RPS20P10-201ENST00000451209 253 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 RNU7-116P-201ENST00000516940 62 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.57□□□□□ -2.16
NKX2-1P43699 RPL21P9-201ENST00000556149 474 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.57□□□□□ -2.16
NKX2-1P43699 MIR4282-201ENST00000583613 67 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 AC005972.2-201ENST00000604690 348 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 Y_RNA.783-201ENST00000613546 102 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 AL590808.1-201ENST00000618696 141 ntBASIC1.57□□□□□ -2.16
NKX2-1P43699 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.57□□□□□ -2.16
NKX2-1P43699 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NKX2-1P43699 Y_RNA.82-201ENST00000363000 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.92-201ENST00000363043 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 RNU6-801P-201ENST00000364087 105 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.235-201ENST00000364412 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.237-201ENST00000364439 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 RNU6-702P-201ENST00000364982 107 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.306-201ENST00000365015 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.312-201ENST00000365089 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.322-201ENST00000365151 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 RNU6-407P-201ENST00000365280 104 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.341-201ENST00000365341 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.352-201ENST00000365439 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.396-201ENST00000383949 103 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.478-201ENST00000384358 107 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.483-201ENST00000384380 101 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.512-201ENST00000384518 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NKX2-1P43699 RNA5SP508-201ENST00000411327 119 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.650-201ENST00000459002 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.777-201ENST00000516982 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 RNA5SP437-201ENST00000517249 129 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 AC024614.2-201ENST00000577584 372 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 MIR3149-201ENST00000584629 83 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.771-201ENST00000598668 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 AC062037.2-201ENST00000610137 73 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 Y_RNA.789-201ENST00000622480 102 ntBASIC1.56□□□□□ -2.16
NKX2-1P43699 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.56□□□□□ -2.16
NKX2-1P43699 AC092881.1-201ENST00000638218 2733 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NKX2-1P43699 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
NKX2-1P43699 Y_RNA.16-201ENST00000362421 102 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 Y_RNA.275-201ENST00000364726 110 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 RNU6-144P-201ENST00000383951 107 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AL135790.2-201ENST00000437701 267 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
NKX2-1P43699 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.55□□□□□ -2.16
NKX2-1P43699 RNU7-28P-201ENST00000516759 62 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 MIR3122-201ENST00000577243 73 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AL162424.1-201ENST00000602325 221 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AC022217.4-201ENST00000604389 163 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AC012493.3-201ENST00000604494 112 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AP003357.1-201ENST00000604497 148 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AC004832.4-201ENST00000608952 331 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 AC064859.1-201ENST00000624741 174 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 MIR6079-201ENST00000635807 62 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
NKX2-1P43699 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms