Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.76□□□□□ -2.29
FDFT1P37268 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.76□□□□□ -2.29
FDFT1P37268 RPS26P48-201ENST00000491713 339 ntBASIC0.76□□□□□ -2.29
FDFT1P37268 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.76□□□□□ -2.29
FDFT1P37268 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
FDFT1P37268 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
FDFT1P37268 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.76□□□□□ -2.29
FDFT1P37268 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.76□□□□□ -2.29
FDFT1P37268 AC093783.1-201ENST00000612976 329 ntBASIC0.76□□□□□ -2.29
FDFT1P37268 MIR373-201ENST00000362273 69 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 RNU6-833P-201ENST00000363486 107 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 Y_RNA.243-201ENST00000364481 109 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 RNU1-93P-201ENST00000364704 169 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 Y_RNA.339-201ENST00000365325 102 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 MIR526A1-201ENST00000384897 85 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 MIR942-201ENST00000401111 86 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 RNA5SP511-201ENST00000410487 115 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 PIGPP3-201ENST00000425307 415 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.75□□□□□ -2.29
FDFT1P37268 ELOCP24-201ENST00000456370 334 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 RPL17P19-201ENST00000489069 552 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 RNU6-307P-201ENST00000516743 106 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
FDFT1P37268 AC120024.3-201ENST00000603167 156 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AC004832.4-201ENST00000608952 331 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AL096861.1-201ENST00000610899 123 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.75□□□□□ -2.29
FDFT1P37268 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.75□□□□□ -2.29
FDFT1P37268 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
FDFT1P37268 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
FDFT1P37268 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
FDFT1P37268 Y_RNA.6-201ENST00000362350 114 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 RNU6-1301P-201ENST00000362724 104 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 Y_RNA.88-201ENST00000363029 99 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 Y_RNA.116-201ENST00000363292 103 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 SNORA75.4-201ENST00000391278 119 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AL354751.2-201ENST00000415471 210 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 MIR2053-201ENST00000459295 91 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 CYCTP-201ENST00000504253 315 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AC011352.1-201ENST00000512300 793 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 RNU6-408P-201ENST00000515910 100 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AC090142.3-201ENST00000519012 385 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.74□□□□□ -2.29
FDFT1P37268 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.74□□□□□ -2.29
FDFT1P37268 AC011712.1-201ENST00000588959 234 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 AC007014.2-201ENST00000615581 479 ntBASIC0.74□□□□□ -2.29
FDFT1P37268 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
FDFT1P37268 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 SNORD114-7-201ENST00000362520 77 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 Y_RNA.269-201ENST00000364685 89 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 RNU6-99P-201ENST00000364721 107 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.73□□□□□ -2.29
FDFT1P37268 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.73□□□□□ -2.29
FDFT1P37268 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.73□□□□□ -2.29
FDFT1P37268 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.73□□□□□ -2.29
FDFT1P37268 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 RNU7-21P-201ENST00000459430 62 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AC023442.1-201ENST00000531247 422 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AL078603.1-201ENST00000603824 313 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 PRELID3BP2-201ENST00000605362 201 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AC004467.1-201ENST00000615678 330 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 AC073869.6-201ENST00000640656 341 ntBASIC0.73□□□□□ -2.29
FDFT1P37268 Y_RNA.336-201ENST00000365307 109 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 SNORD116-13-201ENST00000384408 92 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 RNU6-1105P-201ENST00000384774 107 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.72□□□□□ -2.29
FDFT1P37268 AC069439.1-201ENST00000494739 167 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 AC114811.1-201ENST00000507207 168 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 SNORA70.12-201ENST00000516084 153 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 RNU6-1337P-201ENST00000516525 95 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 MIR2355-201ENST00000517199 87 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.72□□□□□ -2.29
FDFT1P37268 AL391903.3-201ENST00000612158 163 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 AL008636.1-201ENST00000625038 1018 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 AC027279.3-201ENST00000625055 122 ntBASIC0.72□□□□□ -2.29
FDFT1P37268 Y_RNA.122-201ENST00000363331 96 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 RNU4-40P-201ENST00000364351 143 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 RNU6-926P-201ENST00000384075 107 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 MIR452-201ENST00000385020 85 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 AL162725.1-201ENST00000435405 301 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 MTND1P34-201ENST00000438556 671 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 RPEP5-201ENST00000441137 268 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms