Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNU6-933P-201ENST00000384424 107 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 SNORA40.3-201ENST00000390964 122 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNA5SP496-201ENST00000391240 109 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MTCYBP4-201ENST00000401524 249 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MLLT10P1-201ENST00000418346 262 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 AL590632.1-201ENST00000424289 371 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 AL137792.2-201ENST00000443484 235 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MTCO3P38-201ENST00000468910 766 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MTCO1P29-201ENST00000496868 288 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.16□□□□□ -2.44
HOXA6P31267 AC093303.1-201ENST00000514549 295 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 SNORA25.10-201ENST00000515926 124 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNU6-189P-201ENST00000516120 101 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNU6-758P-201ENST00000516292 89 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 SNORA18.6-201ENST00000516792 115 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 RNU6-445P-201ENST00000516949 107 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 AC060788.1-201ENST00000521318 469 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 AL157687.1-201ENST00000554853 619 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MIR4752-201ENST00000579672 72 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MIR548AR-201ENST00000582191 57 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MIR4762-201ENST00000585261 75 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 MIR5692C1-201ENST00000585309 91 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.16□□□□□ -2.44
HOXA6P31267 AL627230.5-201ENST00000619807 58 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 uc_338.22-201ENST00000622722 187 ntBASIC-0.16□□□□□ -2.44
HOXA6P31267 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 RNU6-396P-201ENST00000365369 105 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 SNORA8.3-201ENST00000384679 139 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
HOXA6P31267 RNU6-159P-201ENST00000391080 106 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 SNORA26-201ENST00000391286 122 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.17□□□□□ -2.44
HOXA6P31267 AL354751.2-201ENST00000415471 210 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.17□□□□□ -2.44
HOXA6P31267 MTCO2P16-201ENST00000436962 677 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.17□□□□□ -2.44
HOXA6P31267 RNU7-56P-201ENST00000458744 62 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 RNU6-329P-201ENST00000459618 107 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 MTND2P14-201ENST00000482139 351 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.17□□□□□ -2.44
HOXA6P31267 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.17□□□□□ -2.44
HOXA6P31267 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.17□□□□□ -2.44
HOXA6P31267 AC090617.3-201ENST00000573670 475 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 PIGPP4-201ENST00000584447 307 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC092747.3-201ENST00000603769 301 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC011458.1-201ENST00000604034 617 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC008536.2-201ENST00000607284 349 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AF250324.2-201ENST00000608299 610 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 MIR7107-201ENST00000611489 80 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC004223.4-201ENST00000612426 332 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC103705.1-201ENST00000619013 241 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 AC006504.8-201ENST00000621046 635 ntBASIC-0.17□□□□□ -2.44
HOXA6P31267 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
HOXA6P31267 AC010332.2-201ENST00000613083 1904 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-82P-201ENST00000363970 107 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-580P-201ENST00000365159 107 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU4-20P-201ENST00000365601 151 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-541P-201ENST00000384709 110 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 MIR106A-201ENST00000384870 81 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 MIR644A-201ENST00000385262 94 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU2-54P-201ENST00000410299 190 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.18□□□□□ -2.44
HOXA6P31267 AC073464.1-201ENST00000429823 534 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 MTCO2P11-201ENST00000431069 680 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.18□□□□□ -2.44
HOXA6P31267 MTND1P26-201ENST00000440488 538 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU7-102P-201ENST00000458948 62 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 snoU13.19-201ENST00000459148 104 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-311P-201ENST00000516224 102 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-504P-201ENST00000516568 104 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6-759P-201ENST00000516740 103 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.18□□□□□ -2.44
HOXA6P31267 AC127459.3-201ENST00000624328 466 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.18□□□□□ -2.44
HOXA6P31267 MIR499B-201ENST00000636498 73 ntBASIC-0.18□□□□□ -2.44
HOXA6P31267 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.18□□□□□ -2.44
HOXA6P31267 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.19□□□□□ -2.44
HOXA6P31267 MIR377-201ENST00000362145 69 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 SNORA9.1-201ENST00000362412 131 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 RNU6-214P-201ENST00000384130 107 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 MIR214-201ENST00000385214 110 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 MTCO2P33-201ENST00000402100 465 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.19□□□□□ -2.44
HOXA6P31267 AL031667.1-201ENST00000440222 725 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 AC073415.1-201ENST00000449240 153 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 AC091959.1-201ENST00000495857 238 ntBASIC-0.19□□□□□ -2.44
HOXA6P31267 RNU4-49P-201ENST00000516080 140 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms