Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MTCO2P24-201ENST00000515611 426 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 AC011604.1-201ENST00000545978 196 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 MIR5007-201ENST00000583098 95 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF4P23510 AC046143.2-201ENST00000609789 160 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.97□□□□□ -2.09
TNFSF4P23510 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TNFSF4P23510 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
TNFSF4P23510 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
TNFSF4P23510 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFSF4P23510 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TNFSF4P23510 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TNFSF4P23510 MIRLET7G-201ENST00000362280 84 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 Y_RNA.512-201ENST00000384518 102 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 STAG3L5P-204ENST00000443759 179 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF4P23510 SERF1AP1-201ENST00000514575 187 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 RNA5SP281-201ENST00000516504 135 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF4P23510 AP003357.1-201ENST00000604497 148 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 AL590808.1-201ENST00000618696 141 ntBASIC1.96□□□□□ -2.1
TNFSF4P23510 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFSF4P23510 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TNFSF4P23510 Y_RNA.16-201ENST00000362421 102 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 Y_RNA.461-201ENST00000384263 103 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 MIR1302-3-201ENST00000408128 138 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 Y_RNA.621-201ENST00000411065 96 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 AC104332.1-201ENST00000440471 797 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 POLR3GP1-201ENST00000594073 261 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 AL078604.3-201ENST00000615580 211 ntBASIC1.95□□□□□ -2.1
TNFSF4P23510 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.94□□□□□ -2.1
TNFSF4P23510 MIR21-201ENST00000362134 72 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 RNU6-1123P-201ENST00000362347 106 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 Y_RNA.133-201ENST00000363428 110 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 SNORA72.4-201ENST00000384174 132 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 RNU6-301P-201ENST00000384277 107 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 SNORA67.4-201ENST00000384688 142 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 RNA5SP425-201ENST00000410336 112 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 MTCYBP9-201ENST00000431021 303 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 AC091959.1-201ENST00000495857 238 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 AC008834.1-201ENST00000511612 175 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 RNU7-115P-201ENST00000516433 55 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 DEFB108E-201ENST00000524692 240 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 AP001282.2-201ENST00000616149 309 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 AC073349.3-201ENST00000617616 186 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 MIR548AY-201ENST00000617669 107 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 MIR6766-201ENST00000622641 72 ntBASIC1.94□□□□□ -2.1
TNFSF4P23510 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TNFSF4P23510 AL391987.6-201ENST00000305671 199 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 MIR335-201ENST00000362173 94 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 RNA5SP289-201ENST00000362332 137 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 RNU6-801P-201ENST00000364087 105 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 Y_RNA.556-201ENST00000384677 113 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 RPL30P13-201ENST00000418873 348 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.93□□□□□ -2.1
TNFSF4P23510 PGBD4P5-201ENST00000445958 426 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 snoU13.9-201ENST00000458927 103 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.93□□□□□ -2.1
TNFSF4P23510 RPL23AP94-201ENST00000512518 302 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 SNORA27.4-201ENST00000516650 95 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.93□□□□□ -2.1
TNFSF4P23510 AC024405.2-202ENST00000532731 184 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AL161670.1-201ENST00000554348 137 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AC127455.1-201ENST00000565496 145 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AL513423.1-201ENST00000621695 132 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 AC064859.1-201ENST00000624741 174 ntBASIC1.93□□□□□ -2.1
TNFSF4P23510 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TNFSF4P23510 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
TNFSF4P23510 MIR194-1-201ENST00000384892 85 ntBASIC1.92□□□□□ -2.1
TNFSF4P23510 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.92□□□□□ -2.1
TNFSF4P23510 SCARNA24.2-201ENST00000516968 130 ntBASIC1.92□□□□□ -2.1
TNFSF4P23510 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
TNFSF4P23510 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.92□□□□□ -2.1
TNFSF4P23510 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
TNFSF4P23510 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.92□□□□□ -2.1
TNFSF4P23510 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
TNFSF4P23510 UBE2WP1-201ENST00000362030 340 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 MIR424-201ENST00000362227 98 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 RNU6-899P-201ENST00000363947 107 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 Y_RNA.237-201ENST00000364439 102 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 U8.7-201ENST00000364940 136 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 RNU6-1080P-201ENST00000383982 107 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 Y_RNA.518-201ENST00000384552 113 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 AC004965.1-201ENST00000413033 213 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 RNU7-141P-201ENST00000459304 62 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
TNFSF4P23510 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
TNFSF4P23510 AC117454.1-201ENST00000491120 168 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms