Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNA5SP264-201ENST00000363115 107 ntBASIC0.56□□□□□ -2.32
USF1P22415 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
USF1P22415 Y_RNA.402-201ENST00000383972 102 ntBASIC0.56□□□□□ -2.32
USF1P22415 RNU6-163P-201ENST00000384396 106 ntBASIC0.56□□□□□ -2.32
USF1P22415 RNU6-110P-201ENST00000384508 104 ntBASIC0.56□□□□□ -2.32
USF1P22415 Y_RNA.559-201ENST00000384686 107 ntBASIC0.56□□□□□ -2.32
USF1P22415 RNA5SP475-201ENST00000410568 110 ntBASIC0.56□□□□□ -2.32
USF1P22415 RPS26P5-201ENST00000418544 335 ntBASIC0.56□□□□□ -2.32
USF1P22415 MTND1P17-201ENST00000448961 204 ntBASIC0.56□□□□□ -2.32
USF1P22415 MTND2P38-201ENST00000522536 667 ntBASIC0.56□□□□□ -2.32
USF1P22415 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.56□□□□□ -2.32
USF1P22415 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
USF1P22415 MIR3192-201ENST00000584920 77 ntBASIC0.56□□□□□ -2.32
USF1P22415 AC120024.3-201ENST00000603167 156 ntBASIC0.56□□□□□ -2.32
USF1P22415 AC104465.1-201ENST00000611365 139 ntBASIC0.56□□□□□ -2.32
USF1P22415 MIR6128-201ENST00000615528 109 ntBASIC0.56□□□□□ -2.32
USF1P22415 MIR3662-201ENST00000637030 95 ntBASIC0.56□□□□□ -2.32
USF1P22415 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
USF1P22415 MIR181A1-201ENST00000385026 110 ntBASIC0.55□□□□□ -2.32
USF1P22415 RNU6-700P-201ENST00000391043 107 ntBASIC0.55□□□□□ -2.32
USF1P22415 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
USF1P22415 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.55□□□□□ -2.32
USF1P22415 AC245505.1-201ENST00000556398 224 ntBASIC0.55□□□□□ -2.32
USF1P22415 MIR1273G-201ENST00000577677 100 ntBASIC0.55□□□□□ -2.32
USF1P22415 AF250324.2-201ENST00000608299 610 ntBASIC0.55□□□□□ -2.32
USF1P22415 MIR3674-201ENST00000636576 68 ntBASIC0.55□□□□□ -2.32
USF1P22415 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
USF1P22415 RNU6-879P-201ENST00000364328 108 ntBASIC0.54□□□□□ -2.32
USF1P22415 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
USF1P22415 RNU6-831P-201ENST00000384548 107 ntBASIC0.54□□□□□ -2.32
USF1P22415 MIR452-201ENST00000385020 85 ntBASIC0.54□□□□□ -2.32
USF1P22415 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
USF1P22415 AL139396.1-201ENST00000421137 167 ntBASIC0.54□□□□□ -2.32
USF1P22415 AL035398.1-201ENST00000430869 322 ntBASIC0.54□□□□□ -2.32
USF1P22415 RNU7-87P-201ENST00000459343 62 ntBASIC0.54□□□□□ -2.32
USF1P22415 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
USF1P22415 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.54□□□□□ -2.32
USF1P22415 AC024909.2-201ENST00000553035 286 ntBASIC0.54□□□□□ -2.32
USF1P22415 AL008636.1-201ENST00000625038 1018 ntBASIC0.54□□□□□ -2.32
USF1P22415 RNU6-454P-201ENST00000364292 107 ntBASIC0.53□□□□□ -2.32
USF1P22415 Y_RNA.330-201ENST00000365230 109 ntBASIC0.53□□□□□ -2.32
USF1P22415 RNU6-136P-201ENST00000384663 107 ntBASIC0.53□□□□□ -2.32
USF1P22415 RNA5SP118-201ENST00000410385 109 ntBASIC0.53□□□□□ -2.32
USF1P22415 MTCYBP10-201ENST00000424905 650 ntBASIC0.53□□□□□ -2.32
USF1P22415 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.53□□□□□ -2.32
USF1P22415 RNU6-625P-201ENST00000459412 107 ntBASIC0.53□□□□□ -2.32
USF1P22415 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
USF1P22415 AC105029.1-201ENST00000520250 669 ntBASIC0.53□□□□□ -2.32
USF1P22415 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
USF1P22415 AC007014.2-201ENST00000615581 479 ntBASIC0.53□□□□□ -2.32
USF1P22415 SEPT14P17-201ENST00000617978 177 ntBASIC0.53□□□□□ -2.32
USF1P22415 AC008133.2-201ENST00000624540 351 ntBASIC0.53□□□□□ -2.32
USF1P22415 AC010487.4-201ENST00000637027 61 ntBASIC0.53□□□□□ -2.32
USF1P22415 MIR103A2-201ENST00000362154 78 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.9-201ENST00000362354 101 ntBASIC0.52□□□□□ -2.33
USF1P22415 SNORD68-201ENST00000363214 84 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.157-201ENST00000363638 102 ntBASIC0.52□□□□□ -2.33
USF1P22415 RNY4P14-201ENST00000363656 96 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.194-201ENST00000363985 102 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.243-201ENST00000364481 109 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.517-201ENST00000384551 106 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.557-201ENST00000384680 107 ntBASIC0.52□□□□□ -2.33
USF1P22415 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
USF1P22415 PIGPP3-201ENST00000425307 415 ntBASIC0.52□□□□□ -2.33
USF1P22415 DLGAP5P1-201ENST00000430307 464 ntBASIC0.52□□□□□ -2.33
USF1P22415 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
USF1P22415 RPS20P10-201ENST00000451209 253 ntBASIC0.52□□□□□ -2.33
USF1P22415 U7.7-201ENST00000459276 60 ntBASIC0.52□□□□□ -2.33
USF1P22415 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.52□□□□□ -2.33
USF1P22415 AP003716.2-201ENST00000528260 108 ntBASIC0.52□□□□□ -2.33
USF1P22415 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.52□□□□□ -2.33
USF1P22415 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
USF1P22415 AC005014.2-201ENST00000607795 599 ntBASIC0.52□□□□□ -2.33
USF1P22415 AC103591.3-201ENST00000608684 209 ntBASIC0.52□□□□□ -2.33
USF1P22415 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
USF1P22415 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.52□□□□□ -2.33
USF1P22415 AC100810.6-201ENST00000638068 285 ntBASIC0.52□□□□□ -2.33
USF1P22415 Y_RNA.41-201ENST00000362646 102 ntBASIC0.51□□□□□ -2.33
USF1P22415 Y_RNA.301-201ENST00000364990 103 ntBASIC0.51□□□□□ -2.33
USF1P22415 RNU6-1310P-201ENST00000384153 107 ntBASIC0.51□□□□□ -2.33
USF1P22415 SNORD116-2-201ENST00000384274 95 ntBASIC0.51□□□□□ -2.33
USF1P22415 SNORD116-6-201ENST00000384711 96 ntBASIC0.51□□□□□ -2.33
USF1P22415 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
USF1P22415 MIR1298-201ENST00000408783 112 ntBASIC0.51□□□□□ -2.33
USF1P22415 AL354751.2-201ENST00000415471 210 ntBASIC0.51□□□□□ -2.33
USF1P22415 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.51□□□□□ -2.33
USF1P22415 ELOCP24-201ENST00000456370 334 ntBASIC0.51□□□□□ -2.33
USF1P22415 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
USF1P22415 AC114811.1-201ENST00000507207 168 ntBASIC0.51□□□□□ -2.33
USF1P22415 RNU6-63P-201ENST00000516690 95 ntBASIC0.51□□□□□ -2.33
USF1P22415 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
USF1P22415 MIR4790-201ENST00000577799 79 ntBASIC0.51□□□□□ -2.33
USF1P22415 AC131055.1-201ENST00000584626 316 ntBASIC0.51□□□□□ -2.33
USF1P22415 AC018462.2-201ENST00000605375 395 ntBASIC0.51□□□□□ -2.33
USF1P22415 AC093913.1-201ENST00000614178 329 ntBASIC0.51□□□□□ -2.33
USF1P22415 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
USF1P22415 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
USF1P22415 AC023934.1-201ENST00000574529 2389 ntBASIC0.5□□□□□ -2.33
USF1P22415 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
USF1P22415 U8.5-201ENST00000364528 136 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms