Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CAPN3P20807 RNU6-505P-201ENST00000384427 107 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 MT-TD-201ENST00000387419 68 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 AL390729.2-201ENST00000416137 156 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.53□□□□□ -2.16
CAPN3P20807 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
CAPN3P20807 RNU6-1291P-201ENST00000516591 104 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.53□□□□□ -2.16
CAPN3P20807 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 AC240442.1-201ENST00000616055 283 ntBASIC1.53□□□□□ -2.16
CAPN3P20807 Y_RNA.124-201ENST00000363339 93 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 RNU6-324P-201ENST00000363957 106 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 Y_RNA.526-201ENST00000384572 110 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 AL031003.1-201ENST00000404229 172 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 RNU5A-5P-201ENST00000411054 116 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.52□□□□□ -2.17
CAPN3P20807 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.52□□□□□ -2.17
CAPN3P20807 AC022616.4-201ENST00000522985 181 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 CYP3A52P-201ENST00000563326 91 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 MIR4452-201ENST00000583004 71 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
CAPN3P20807 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CAPN3P20807 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CAPN3P20807 RNU6-626P-201ENST00000363354 107 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RNY3P11-201ENST00000364153 102 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RNU6-20P-201ENST00000384106 107 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 Y_RNA.463-201ENST00000384271 102 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RNU6-1105P-201ENST00000384774 107 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 U8.19-201ENST00000459095 133 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
CAPN3P20807 RNU7-12P-201ENST00000516030 62 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RNU6-976P-201ENST00000516086 111 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RNU6-155P-201ENST00000516347 100 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 RPS29P30-201ENST00000600975 111 ntBASIC1.51□□□□□ -2.17
CAPN3P20807 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CAPN3P20807 Y_RNA.303-201ENST00000364998 94 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 AL162725.1-201ENST00000435405 301 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 OR9P1P-201ENST00000496431 281 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 MIR4778-201ENST00000577635 80 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 Y_RNA.772-201ENST00000606692 102 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 AC138305.3-201ENST00000624988 240 ntBASIC1.5□□□□□ -2.17
CAPN3P20807 MIR26B-201ENST00000362251 77 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 RNU1-115P-201ENST00000365329 160 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 Y_RNA.529-201ENST00000384586 119 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 Y_RNA.621-201ENST00000411065 96 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 CALM2P4-201ENST00000430810 426 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 CHEK2P4-201ENST00000450340 246 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 Y_RNA.661-201ENST00000516003 99 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 RNU6-1337P-201ENST00000516525 95 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 RNA5SP480-201ENST00000516840 109 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 Y_RNA.713-201ENST00000517013 96 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.49□□□□□ -2.17
CAPN3P20807 GHRLOS.1-201ENST00000610995 70 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 MIR6734-201ENST00000621166 68 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 MIR4272-201ENST00000635924 64 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 U6.92-201ENST00000636464 89 ntBASIC1.49□□□□□ -2.17
CAPN3P20807 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CAPN3P20807 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CAPN3P20807 Y_RNA.315-201ENST00000365117 102 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 AL354751.2-201ENST00000415471 210 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 AC024067.1-201ENST00000426199 223 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 RN7SKP295-201ENST00000517264 153 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
CAPN3P20807 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.48□□□□□ -2.17
CAPN3P20807 RNU6-1115P-201ENST00000362490 106 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 Y_RNA.101-201ENST00000363154 102 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 SNORA7.1-201ENST00000363750 139 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 Y_RNA.446-201ENST00000384178 104 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 RNU6-136P-201ENST00000384663 107 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 U8.16-201ENST00000391279 133 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
CAPN3P20807 AC096644.2-201ENST00000429278 159 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 RPS4XP11-201ENST00000446897 772 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 RNU6-63P-201ENST00000516690 95 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.47□□□□□ -2.17
CAPN3P20807 AC019288.1-201ENST00000557918 224 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 AP001094.1-201ENST00000579805 193 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 AC011476.5-201ENST00000615594 130 ntBASIC1.47□□□□□ -2.17
CAPN3P20807 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.47□□□□□ -2.17
CAPN3P20807 Y_RNA.252-201ENST00000364556 101 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 MIR653-201ENST00000385279 96 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC022028.1-201ENST00000412054 408 ntBASIC1.46□□□□□ -2.18
CAPN3P20807 AC005042.3-201ENST00000453230 174 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms