| CPA3 | P15088 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC092755.1-201 | ENST00000441746 | 97 nt | TSL 3 BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | RNU6-875P-201 | ENST00000516488 | 106 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AL355375.2-201 | ENST00000574825 | 175 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | MIR4659A-201 | ENST00000580269 | 81 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC133104.2-201 | ENST00000615272 | 193 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | U6.92-201 | ENST00000636464 | 89 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CPA3 | P15088 | LRRIQ1-202 | ENST00000393217 | 5394 nt | APPRIS P1 TSL 1 (best) BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | LRRD1-203 | ENST00000430130 | 2661 nt | APPRIS P1 TSL 5 BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | RNU6-626P-201 | ENST00000363354 | 107 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC108667.1-201 | ENST00000428618 | 249 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC092813.2-201 | ENST00000434540 | 399 nt | TSL 3 BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | Y_RNA.632-201 | ENST00000459189 | 102 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | AC091925.1-201 | ENST00000623204 | 462 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | EYS-205 | ENST00000393380 | 5450 nt | TSL 1 (best) BASIC | 1.16 | □□□□□ -2.22 | | |
| CPA3 | P15088 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.27-201 | ENST00000362540 | 103 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.384-201 | ENST00000383909 | 102 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AP001825.1-201 | ENST00000534275 | 351 nt | TSL 2 BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR4421-201 | ENST00000578133 | 69 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC005176.2-201 | ENST00000596933 | 147 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC103810.9-201 | ENST00000606688 | 112 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CPA3 | P15088 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.446-201 | ENST00000384178 | 104 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORD19B-201 | ENST00000459623 | 84 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA70.12-201 | ENST00000516084 | 153 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-436P-201 | ENST00000516171 | 114 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC006380.1-201 | ENST00000603598 | 186 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC104985.2-201 | ENST00000620598 | 500 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR4272-201 | ENST00000635924 | 64 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.70-201 | ENST00000362886 | 110 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.187-201 | ENST00000363918 | 113 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-1080P-201 | ENST00000383982 | 107 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA25-201 | ENST00000384384 | 134 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.529-201 | ENST00000384586 | 119 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA22C-201 | ENST00000384614 | 134 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR526A1-201 | ENST00000384897 | 85 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AF228730.4-201 | ENST00000421457 | 183 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC048334.1-201 | ENST00000477975 | 159 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-507P-201 | ENST00000516045 | 100 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC093027.1-201 | ENST00000546698 | 429 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | VN1R91P-201 | ENST00000594377 | 169 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AL022345.2-201 | ENST00000606307 | 135 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Metazoa_SRP.32-201 | ENST00000622685 | 286 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| CPA3 | P15088 | ZGRF1-202 | ENST00000309071 | 3347 nt | TSL 1 (best) BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.146-201 | ENST00000363549 | 102 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR628-201 | ENST00000385229 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA17.3-201 | ENST00000391159 | 129 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AL163540.1-201 | ENST00000485382 | 386 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC108729.3-201 | ENST00000513484 | 108 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORD116-28-201 | ENST00000516123 | 91 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-155P-201 | ENST00000516347 | 100 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC006600.1-201 | ENST00000572529 | 153 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | ST7-AS1_1.1-201 | ENST00000611142 | 116 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | KLRA1P-203 | ENST00000535939 | 2353 nt | TSL 1 (best) BASIC | 1.12 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.263-201 | ENST00000364659 | 114 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.363-201 | ENST00000365529 | 113 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | TRAJ3-201 | ENST00000390534 | 62 nt | APPRIS P1 BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RNU4-62P-201 | ENST00000410125 | 130 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC104332.1-201 | ENST00000440471 | 797 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | Y_RNA.638-201 | ENST00000459374 | 113 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | SNORA31.2-201 | ENST00000516019 | 134 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | MIR4423-201 | ENST00000580922 | 80 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AC022596.1-201 | ENST00000582895 | 302 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | BX284668.6-201 | ENST00000606899 | 438 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | AL591926.4-201 | ENST00000616895 | 298 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CPA3 | P15088 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |