Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 SNORA20B-201ENST00000384220 132 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 SNORA12.1-201ENST00000390873 148 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.44□□□□□ -2.34
COL4A2P08572 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.44□□□□□ -2.34
COL4A2P08572 SNORD124-201ENST00000459577 104 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AP000870.1-201ENST00000472927 406 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC091179.3-201ENST00000474761 144 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 OR9P1P-201ENST00000496431 281 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC022493.2-201ENST00000506122 481 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 PSMC1P5-201ENST00000512850 177 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC090617.3-201ENST00000573670 475 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 MIR5589-201ENST00000579442 60 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 MIR6128-201ENST00000615528 109 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC005592.1-201ENST00000566527 1640 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 SNORA1B-201ENST00000362535 133 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 RNY1P16-201ENST00000363063 111 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 Y_RNA.301-201ENST00000364990 103 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 RNU6-780P-201ENST00000391030 104 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 RNU6-510P-201ENST00000391239 108 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 EIF1P2-201ENST00000428233 350 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 USP9YP30-201ENST00000430729 455 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AC093019.1-201ENST00000443135 252 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 MTND1P29-201ENST00000448112 647 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 RNU6-917P-201ENST00000516294 104 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.44□□□□□ -2.34
COL4A2P08572 AC080078.2-201ENST00000603766 501 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 MIR6079-201ENST00000635807 62 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 U6.115-201ENST00000636045 103 ntBASIC0.44□□□□□ -2.34
COL4A2P08572 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
COL4A2P08572 Y_RNA.9-201ENST00000362354 101 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 SNORA27.1-201ENST00000362604 124 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 Y_RNA.41-201ENST00000362646 102 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 Y_RNA.124-201ENST00000363339 93 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 RNU6-1310P-201ENST00000384153 107 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 MIR329-1-201ENST00000385028 80 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 MTCYBP10-201ENST00000424905 650 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 CALM2P4-201ENST00000430810 426 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC233266.1-201ENST00000454518 96 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 HMGN2P26-201ENST00000463169 339 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.43□□□□□ -2.34
COL4A2P08572 RNU6-1114P-201ENST00000516022 107 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AP003327.1-201ENST00000529684 127 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 MIR4514-201ENST00000581410 57 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC100812.1-201ENST00000607622 580 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC004832.4-201ENST00000608952 331 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC242852.1-201ENST00000612151 96 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC093913.1-201ENST00000614178 329 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC244015.1-201ENST00000622301 99 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 AC127459.3-201ENST00000624328 466 ntBASIC0.43□□□□□ -2.34
COL4A2P08572 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
COL4A2P08572 Y_RNA.48-201ENST00000362710 103 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 Y_RNA.136-201ENST00000363444 102 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNY4P14-201ENST00000363656 96 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNU6-163P-201ENST00000384396 106 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 MIR329-2-201ENST00000385029 84 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
COL4A2P08572 USP9YP16-201ENST00000430287 407 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 FABP5P4-201ENST00000437203 171 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 MRPS10P1-201ENST00000448483 130 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 USP9YP23-201ENST00000455085 407 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 PDCD5P2-201ENST00000507570 312 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNU6-864P-201ENST00000516256 108 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNU6-273P-201ENST00000516937 96 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.42□□□□□ -2.34
COL4A2P08572 AC006380.1-201ENST00000603598 186 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 AC005828.6-201ENST00000606610 232 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 AF250324.2-201ENST00000608299 610 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
COL4A2P08572 AC015540.1-201ENST00000615828 501 ntBASIC0.42□□□□□ -2.34
COL4A2P08572 RNU6-451P-201ENST00000362921 107 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 Y_RNA.106-201ENST00000363189 100 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.41□□□□□ -2.34
COL4A2P08572 RNU6-969P-201ENST00000383900 105 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 RNU6-842P-201ENST00000384269 107 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 SNORD116-2-201ENST00000384274 95 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 SNORD116-13-201ENST00000384408 92 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 Y_RNA.557-201ENST00000384680 107 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 SNORD116-6-201ENST00000384711 96 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 MIR520G-201ENST00000385064 90 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AC006461.1-201ENST00000412637 326 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 Z95118.1-201ENST00000421372 247 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 U7.7-201ENST00000459276 60 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 RNU7-21P-201ENST00000459430 62 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AC113410.1-201ENST00000505029 247 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.41□□□□□ -2.34
COL4A2P08572 RNU6-1291P-201ENST00000516591 104 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AC018448.1-201ENST00000552843 316 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.41□□□□□ -2.34
COL4A2P08572 MIR3942-201ENST00000585264 109 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AL117336.2-201ENST00000602435 335 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 AC090617.10-201ENST00000624308 134 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
COL4A2P08572 SNORD68-201ENST00000363214 84 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 RNU6-454P-201ENST00000364292 107 ntBASIC0.41□□□□□ -2.34
COL4A2P08572 Y_RNA.330-201ENST00000365230 109 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms