Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC074133.1-201ENST00000515696 183 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 RNU6-63P-201ENST00000516690 95 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.39□□□□□ -2.19
PDGFBP01127 AL442163.3-201ENST00000554110 156 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 AL117336.2-201ENST00000602435 335 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 AL929325.1-201ENST00000603096 117 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 U6.73-201ENST00000619194 103 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 U6.92-201ENST00000636464 89 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 U6.108-201ENST00000637764 58 ntBASIC1.39□□□□□ -2.19
PDGFBP01127 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PDGFBP01127 Y_RNA.39-201ENST00000362620 98 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 RNU6-203P-201ENST00000384038 104 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 RPS26P45-201ENST00000471748 340 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
PDGFBP01127 RNU6-1170P-201ENST00000515974 106 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 RNA5SP20-201ENST00000515976 84 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 RNU7-172P-201ENST00000517125 64 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.38□□□□□ -2.19
PDGFBP01127 AC022432.1-201ENST00000595739 310 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 AL021879.1-201ENST00000611756 288 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 U6.115-201ENST00000636045 103 ntBASIC1.38□□□□□ -2.19
PDGFBP01127 AC091812.1-201ENST00000432235 1948 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 RNU6-1115P-201ENST00000362490 106 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 Y_RNA.101-201ENST00000363154 102 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 RNU6-376P-201ENST00000384731 106 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 SNORD78.2-201ENST00000391076 69 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 Y_RNA.604-201ENST00000410574 102 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 RPL30P13-201ENST00000418873 348 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC018865.2-201ENST00000423631 129 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 RPS27P16-201ENST00000425758 201 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC245047.3-201ENST00000429428 127 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.37□□□□□ -2.19
PDGFBP01127 RPEP5-201ENST00000441137 268 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 FCF1P4-201ENST00000448326 183 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 MRPS10P1-201ENST00000448483 130 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC233266.1-201ENST00000454518 96 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 MIR2355-201ENST00000517199 87 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.37□□□□□ -2.19
PDGFBP01127 MIR5188-201ENST00000583467 113 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 VN1R91P-201ENST00000594377 169 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC005176.2-201ENST00000596933 147 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC022217.4-201ENST00000604389 163 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC242852.1-201ENST00000612151 96 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 AC244015.1-201ENST00000622301 99 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 MIR4272-201ENST00000635924 64 ntBASIC1.37□□□□□ -2.19
PDGFBP01127 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PDGFBP01127 Y_RNA.31-201ENST00000362574 102 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 RNU6-1310P-201ENST00000384153 107 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 RNU6-1105P-201ENST00000384774 107 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 MIR194-1-201ENST00000384892 85 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.36□□□□□ -2.19
PDGFBP01127 RNU7-152P-201ENST00000458982 64 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 RNU6-155P-201ENST00000516347 100 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 RNU4-77P-201ENST00000516692 156 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 AL080274.1-201ENST00000605565 220 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 LARP7P1-201ENST00000605576 316 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 AL050343.2-201ENST00000607338 280 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
PDGFBP01127 AL078604.3-201ENST00000615580 211 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 AC240442.1-201ENST00000616055 283 ntBASIC1.36□□□□□ -2.19
PDGFBP01127 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.36□□□□□ -2.19
PDGFBP01127 RNU6-1123P-201ENST00000362347 106 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 Y_RNA.197-201ENST00000364004 102 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.35□□□□□ -2.19
PDGFBP01127 Y_RNA.394-201ENST00000383942 103 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNY3P4-201ENST00000384428 101 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 SNX2P2-201ENST00000424553 323 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNU7-99P-201ENST00000516271 62 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNU6-966P-201ENST00000516479 104 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNU6-1291P-201ENST00000516591 104 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 RNU7-128P-201ENST00000517247 62 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.35□□□□□ -2.19
PDGFBP01127 RPL21P9-201ENST00000556149 474 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 C8orf59P2-201ENST00000603441 271 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 SNORD58B-201ENST00000607313 66 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 AC090971.5-201ENST00000621102 293 ntBASIC1.35□□□□□ -2.19
PDGFBP01127 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 Y_RNA.445-201ENST00000384168 102 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 Y_RNA.509-201ENST00000384506 99 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 Y_RNA.621-201ENST00000411065 96 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 MTCO3P19-201ENST00000415864 321 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.34□□□□□ -2.19
PDGFBP01127 STAG3L5P-204ENST00000443759 179 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC091021.1-201ENST00000468051 388 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC023790.1-201ENST00000482174 347 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC093852.1-201ENST00000503587 266 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 RNU6-976P-201ENST00000516086 111 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 SNORA31.10-201ENST00000516482 106 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 RNU6-1012P-201ENST00000516606 109 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 SUMO2P16-201ENST00000519475 264 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms