Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 RNU6-136P-201ENST00000384663 107 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 MIR653-201ENST00000385279 96 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 MT-TD-201ENST00000387419 68 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 Y_RNA.579-201ENST00000390939 94 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.32□□□□□ -2.2
PLOD3O60568 AC108667.1-201ENST00000428618 249 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
PLOD3O60568 FCF1P4-201ENST00000448326 183 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.32□□□□□ -2.2
PLOD3O60568 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 RNU6-1096P-201ENST00000517089 102 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 AL022345.2-201ENST00000606307 135 ntBASIC1.32□□□□□ -2.2
PLOD3O60568 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PLOD3O60568 SNORD78.2-201ENST00000391076 69 ntBASIC1.31□□□□□ -2.2
PLOD3O60568 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.31□□□□□ -2.2
PLOD3O60568 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
PLOD3O60568 CHEK2P4-201ENST00000450340 246 ntBASIC1.31□□□□□ -2.2
PLOD3O60568 MIR4659A-201ENST00000580269 81 ntBASIC1.31□□□□□ -2.2
PLOD3O60568 AC092447.9-201ENST00000603395 144 ntBASIC1.31□□□□□ -2.2
PLOD3O60568 AC005592.1-201ENST00000566527 1640 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 RNU4-79P-201ENST00000362764 141 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 RNY3P4-201ENST00000384428 101 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 RNU7-152P-201ENST00000458982 64 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
PLOD3O60568 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 VN1R91P-201ENST00000594377 169 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 AC138305.3-201ENST00000624988 240 ntBASIC1.3□□□□□ -2.2
PLOD3O60568 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
PLOD3O60568 RNU6-1115P-201ENST00000362490 106 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 Y_RNA.80-201ENST00000362996 102 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 Y_RNA.124-201ENST00000363339 93 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 RNU6-626P-201ENST00000363354 107 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 RNU6-324P-201ENST00000363957 106 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 RNU6-117P-201ENST00000365415 107 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 Y_RNA.419-201ENST00000384041 102 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 RNU6-20P-201ENST00000384106 107 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 Y_RNA.485-201ENST00000384395 102 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 RNU5A-5P-201ENST00000411054 116 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 AC022028.1-201ENST00000412054 408 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 SNORA31.2-201ENST00000516019 134 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 AC055872.1-201ENST00000570978 278 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 AC005176.2-201ENST00000596933 147 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 AC006157.1-201ENST00000611750 366 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 U6.92-201ENST00000636464 89 ntBASIC1.29□□□□□ -2.2
PLOD3O60568 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PLOD3O60568 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
PLOD3O60568 Y_RNA.39-201ENST00000362620 98 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 Y_RNA.315-201ENST00000365117 102 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 Y_RNA.496-201ENST00000384444 101 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 Y_RNA.621-201ENST00000411065 96 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 AF228730.4-201ENST00000421457 183 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 RNU6-63P-201ENST00000516690 95 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 AL133255.1-201ENST00000606374 441 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
PLOD3O60568 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 AL008636.1-201ENST00000625038 1018 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 MIR4272-201ENST00000635924 64 ntBASIC1.28□□□□□ -2.2
PLOD3O60568 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PLOD3O60568 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
PLOD3O60568 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 MTND1P14-201ENST00000427400 950 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 AL163540.1-201ENST00000485382 386 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 RNU6-911P-201ENST00000516523 104 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 RNU6-1012P-201ENST00000516606 109 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.27□□□□□ -2.21
PLOD3O60568 RPS29P30-201ENST00000600975 111 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 AC240442.1-201ENST00000616055 283 ntBASIC1.27□□□□□ -2.21
PLOD3O60568 MIR369-201ENST00000362155 70 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 Y_RNA.5-201ENST00000362334 102 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 Y_RNA.27-201ENST00000362540 103 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 Y_RNA.101-201ENST00000363154 102 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 Y_RNA.813-201ENST00000364639 102 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU5E-4P-201ENST00000364931 120 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-867P-201ENST00000364956 107 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-163P-201ENST00000384396 106 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 MIR891A-201ENST00000401237 79 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-976P-201ENST00000516086 111 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-917P-201ENST00000516294 104 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 RNU6-155P-201ENST00000516347 100 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.26□□□□□ -2.21
PLOD3O60568 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
PLOD3O60568 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
PLOD3O60568 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 AL160004.2-201ENST00000432935 350 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 AC104332.1-201ENST00000440471 797 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 LINC01399-202ENST00000458450 244 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
PLOD3O60568 RNU6-1170P-201ENST00000515974 106 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms