Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU1-148P-201ENST00000384472 162 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR626-201ENST00000385032 94 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC005840.1-201ENST00000498412 377 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 RN7SKP164-201ENST00000516138 266 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC090517.3-201ENST00000625170 141 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
SMAD6O43541 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.17□□□□□ -2.06
SMAD6O43541 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.24-201ENST00000362508 103 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.172-201ENST00000363765 102 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-899P-201ENST00000363947 107 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-151P-201ENST00000364158 107 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.215-201ENST00000364204 112 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.456-201ENST00000384232 111 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 SNORA8.3-201ENST00000384679 139 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.568-201ENST00000384742 113 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-578P-201ENST00000390980 103 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 MIR1185-2-201ENST00000408687 86 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RN7SKP284-201ENST00000411002 343 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 EBAG9P1-201ENST00000418955 543 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AL162725.1-201ENST00000435405 301 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU7-141P-201ENST00000459304 62 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 SCARNA8-201ENST00000515924 131 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-453P-201ENST00000516819 85 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.17□□□□□ -2.06
SMAD6O43541 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.17□□□□□ -2.06
SMAD6O43541 MIR4744-201ENST00000581563 82 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RPL17P51-201ENST00000605218 238 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC025754.2-201ENST00000606491 432 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.778-201ENST00000620203 90 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SMAD6O43541 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SMAD6O43541 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
SMAD6O43541 Y_RNA.124-201ENST00000363339 93 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-103P-201ENST00000363686 107 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-969P-201ENST00000383900 105 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-1081P-201ENST00000384537 107 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-239P-201ENST00000390990 99 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
SMAD6O43541 RNA5SP272-201ENST00000516095 111 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-426P-201ENST00000516464 97 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 Y_RNA.802-201ENST00000614892 130 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 AC091895.1-201ENST00000624494 256 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ZNF720P1-201ENST00000562403 1939 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1205P-201ENST00000363625 106 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1117P-201ENST00000384525 104 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1274P-201ENST00000384557 107 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR29B2-201ENST00000385055 81 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR569-201ENST00000385228 96 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 AC245047.8-201ENST00000456455 284 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU7-14P-201ENST00000459331 62 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 SNORA70.12-201ENST00000516084 153 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU7-121P-201ENST00000516604 62 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR4431-201ENST00000579990 94 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SMAD6O43541 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMAD6O43541 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMAD6O43541 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-944P-201ENST00000364023 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-959P-201ENST00000384671 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR526A2-201ENST00000390198 65 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 Y_RNA.586-201ENST00000391146 98 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AL355796.1-201ENST00000406706 323 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU7-57P-201ENST00000459540 60 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-1007P-201ENST00000516586 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC022616.8-201ENST00000533569 253 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC109810.1-201ENST00000534066 224 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR3126-201ENST00000577443 74 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.14□□□□□ -2.07
SMAD6O43541 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMAD6O43541 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 RNU1-72P-201ENST00000362976 153 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 U8.7-201ENST00000364940 136 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms