Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
PHGDHO43175 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
PHGDHO43175 RNU6-1272P-201ENST00000362776 107 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 MIR520A-201ENST00000384862 85 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 RNA5SP109-201ENST00000391010 116 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 SNORD58.1-201ENST00000391313 66 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 AL135786.1-201ENST00000415892 214 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 AC108059.2-201ENST00000434626 151 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 RNU6-1096P-201ENST00000517089 102 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 MIR6895-201ENST00000613497 78 ntBASIC2.19□□□□□ -2.06
PHGDHO43175 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PHGDHO43175 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PHGDHO43175 RNU6-112P-201ENST00000363599 104 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 Y_RNA.267-201ENST00000364679 109 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 RNU6-301P-201ENST00000384277 107 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 MTCO2P33-201ENST00000402100 465 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.18□□□□□ -2.06
PHGDHO43175 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AC104332.1-201ENST00000440471 797 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL606517.2-201ENST00000442855 241 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 RPS4XP11-201ENST00000446897 772 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AC117454.1-201ENST00000491120 168 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 MIR4435-1-201ENST00000582552 80 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AC091178.2-201ENST00000584401 117 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL008718.3-201ENST00000610217 321 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AL078604.3-201ENST00000615580 211 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
PHGDHO43175 AC008555.8-201ENST00000623602 2168 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PHGDHO43175 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PHGDHO43175 SNORA63D-201ENST00000364359 132 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 Y_RNA.257-201ENST00000364596 102 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU6-211P-201ENST00000384047 107 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 MIR562-201ENST00000384894 95 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 Y_RNA.590-201ENST00000410140 107 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC245047.3-201ENST00000429428 127 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC233266.1-201ENST00000454518 96 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU7-141P-201ENST00000459304 62 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 Y_RNA.679-201ENST00000516416 91 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU7-115P-201ENST00000516433 55 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU6-1291P-201ENST00000516591 104 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU7-116P-201ENST00000516940 62 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.17□□□□□ -2.06
PHGDHO43175 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.17□□□□□ -2.06
PHGDHO43175 POLR3GP1-201ENST00000594073 261 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC022217.4-201ENST00000604389 163 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC011921.3-201ENST00000605540 361 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC242852.1-201ENST00000612151 96 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 MIR548AY-201ENST00000617669 107 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC141273.2-201ENST00000618989 130 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 AC244015.1-201ENST00000622301 99 ntBASIC2.17□□□□□ -2.06
PHGDHO43175 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PHGDHO43175 RNU6-899P-201ENST00000363947 107 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 U8.7-201ENST00000364940 136 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 RNU6-1323P-201ENST00000384025 107 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 Y_RNA.552-201ENST00000384665 112 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.16□□□□□ -2.06
PHGDHO43175 AC024405.2-202ENST00000532731 184 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.16□□□□□ -2.06
PHGDHO43175 MIR4282-201ENST00000583613 67 ntBASIC2.16□□□□□ -2.06
PHGDHO43175 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.16□□□□□ -2.06
PHGDHO43175 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PHGDHO43175 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PHGDHO43175 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.15□□□□□ -2.06
PHGDHO43175 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PHGDHO43175 MIR449A-201ENST00000362113 91 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 RNU4-82P-201ENST00000362443 140 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.82-201ENST00000363000 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.92-201ENST00000363043 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.235-201ENST00000364412 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.292-201ENST00000364904 97 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.306-201ENST00000365015 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.312-201ENST00000365089 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.322-201ENST00000365151 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 RNU6-296P-201ENST00000384608 107 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.621-201ENST00000411065 96 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 RPS27P1-201ENST00000450552 247 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 SNORD2.1-201ENST00000458762 69 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.650-201ENST00000459002 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.15□□□□□ -2.07
PHGDHO43175 Y_RNA.777-201ENST00000516982 102 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 RNA5SP437-201ENST00000517249 129 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
PHGDHO43175 AC011604.1-201ENST00000545978 196 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
PHGDHO43175 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms