Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 Y_RNA.557-201ENST00000384680 107 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 SNORD89-201ENST00000390981 114 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 MIR548J-201ENST00000408833 112 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.51□□□□□ -2.33
AP3B1O00203 RPL23AP50-201ENST00000434149 455 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.51□□□□□ -2.33
AP3B1O00203 RPS20P10-201ENST00000451209 253 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 RNU6-625P-201ENST00000459412 107 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.51□□□□□ -2.33
AP3B1O00203 RNU6-1110P-201ENST00000516462 101 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 MTND4LP26-201ENST00000518144 282 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 AC005014.2-201ENST00000607795 599 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 MIR6788-201ENST00000618842 66 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 MIR3662-201ENST00000637030 95 ntBASIC0.51□□□□□ -2.33
AP3B1O00203 U8.5-201ENST00000364528 136 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNU4-75P-201ENST00000364621 146 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 Y_RNA.559-201ENST00000384686 107 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNA5SP511-201ENST00000410487 115 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNA5SP475-201ENST00000410568 110 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 AL354751.2-201ENST00000415471 210 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 MTND3P21-201ENST00000433774 331 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 MTND4LP16-201ENST00000440828 295 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 AC098826.2-201ENST00000452011 651 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 ELOCP24-201ENST00000456370 334 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNU7-41P-201ENST00000515917 61 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 SNORA74.3-201ENST00000517108 154 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 AC105029.1-201ENST00000520250 669 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
AP3B1O00203 RNY1P16-201ENST00000363063 111 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 Y_RNA.402-201ENST00000383972 102 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RNU6-1013P-201ENST00000384180 107 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RNU6-1105P-201ENST00000384774 107 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RNU6-700P-201ENST00000391043 107 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 Y_RNA.621-201ENST00000411065 96 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.49□□□□□ -2.33
AP3B1O00203 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.49□□□□□ -2.33
AP3B1O00203 AL353997.1-201ENST00000432936 108 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 UBE2V1P7-201ENST00000446395 340 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 SNORA40.9-201ENST00000515895 93 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RN7SKP164-201ENST00000516138 266 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 MIR4762-201ENST00000585261 75 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 RNU6-94P-201ENST00000607728 107 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 AL591926.4-201ENST00000616895 298 ntBASIC0.49□□□□□ -2.33
AP3B1O00203 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
AP3B1O00203 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 Y_RNA.361-201ENST00000365515 120 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
AP3B1O00203 RNU6-318P-201ENST00000384283 103 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.48□□□□□ -2.33
AP3B1O00203 AC009161.1-201ENST00000417306 376 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 MTCYBP10-201ENST00000424905 650 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 MTND2P38-201ENST00000522536 667 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 AC245505.1-201ENST00000556398 224 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
AP3B1O00203 Y_RNA.301-201ENST00000364990 103 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 AC117470.1-201ENST00000381974 330 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 MIR499A-201ENST00000384903 122 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 AL390729.2-201ENST00000416137 156 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 AC026782.1-201ENST00000512952 449 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.47□□□□□ -2.33
AP3B1O00203 MIR4790-201ENST00000577799 79 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 AC018462.2-201ENST00000605375 395 ntBASIC0.47□□□□□ -2.33
AP3B1O00203 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.47□□□□□ -2.33
AP3B1O00203 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.47□□□□□ -2.33
AP3B1O00203 RNY4P14-201ENST00000363656 96 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 Y_RNA.358-201ENST00000365491 99 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 Y_RNA.517-201ENST00000384551 106 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 MIR181A1-201ENST00000385026 110 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 MIR136-201ENST00000385207 82 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 RNU1-119P-201ENST00000391122 165 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
AP3B1O00203 AL139396.1-201ENST00000421137 167 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 RNU6-1337P-201ENST00000516525 95 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 AC036111.3-201ENST00000526389 112 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 MIR4764-201ENST00000580680 88 ntBASIC0.46□□□□□ -2.34
AP3B1O00203 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 SNORD14.1-201ENST00000365609 90 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 RNU6-1310P-201ENST00000384153 107 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 Y_RNA.554-201ENST00000384672 102 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.45□□□□□ -2.34
AP3B1O00203 MTND5P5-201ENST00000503764 376 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 SNORA18.7-201ENST00000516910 131 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 MIR5000-201ENST00000577717 103 ntBASIC0.45□□□□□ -2.34
AP3B1O00203 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.45□□□□□ -2.34
AP3B1O00203 Y_RNA.2-201ENST00000362330 96 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 Y_RNA.157-201ENST00000363638 102 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 RNA5SP48-201ENST00000363969 126 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 Y_RNA.194-201ENST00000363985 102 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 SNORD115-30-201ENST00000364117 82 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 SNORD116-2-201ENST00000384274 95 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 SNORD116-6-201ENST00000384711 96 ntBASIC0.44□□□□□ -2.34
AP3B1O00203 AC074085.1-201ENST00000413598 418 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms